RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 SLC35F1Q5T1Q4 408 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 UNQ6126/PRO20091Q6UXV3 157 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 CD300LDQ6UXZ3 194 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 SDR9C7Q8NEX9 313 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 OR52E2Q8NGJ4 325 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 AKR7LQ8NHP1 331 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 TEX47Q8TBZ9 253 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 FOXN4Q96NZ1 517 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 FEVQ99581 238 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 NIPSNAP1Q9BPW8 284 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 BDH2Q9BUT1 245 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 TMUB1Q9BVT8 246 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 TSSK6Q9BXA6 273 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 PLA2G12AQ9BZM1 189 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 OR2H1Q9GZK4 316 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 PLK3Q9H4B4 646 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 ZNF556Q9HAH1 456 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 EMC7Q9NPA0 242 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 EIF3KQ9UBQ5 218 aaKnown RBP9.89□□□□□ -0.83
COL28A1-203ENST00000435823 NDRG4Q9ULP0 352 aaKnown RBP9.89□□□□□ -0.83
COL28A1-203ENST00000435823 B9D1Q9UPM9 204 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 FKBP7Q9Y680 259 aa9.89□□□□□ -0.83
COL28A1-203ENST00000435823 H3BN98 237 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 BHLHE40O14503 412 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 TIPRLO75663 272 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 SOX14O95416 240 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 SNAP29O95721 258 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 IGHV4-39P01824 125 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 FAM157BP0CG42 384 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 CCL2P13500 99 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 ANXA8P13928 327 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 CCNOP22674 350 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 APEX1P27695 318 aaKnown RBP9.88□□□□□ -0.83
COL28A1-203ENST00000435823 RAD52P43351 418 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 LSM6P62312 80 aaKnown RBP9.88□□□□□ -0.83
COL28A1-203ENST00000435823 GLO1Q04760 184 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 AQP6Q13520 282 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 CLEC12BQ2HXU8 276 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 MST1LQ2TV78 715 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 UGT2A3Q6UWM9 527 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 ASRGL1Q7L266 308 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 TMEM179BQ7Z7N9 219 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 SVOPLQ8N434 492 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 LNX2Q8N448 690 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 CPEB3Q8NE35 698 aaKnown RBP9.88□□□□□ -0.83
COL28A1-203ENST00000435823 OR10H5Q8NGA6 315 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 OR8D4Q8NGM9 314 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 C11orf40Q8WZ69 217 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 MRPL24Q96A35 216 aaKnown RBP9.88□□□□□ -0.83
COL28A1-203ENST00000435823 SLCO4A1Q96BD0 722 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 TSSK2Q96PF2 358 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 BCL2L14Q9BZR8 327 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 RACGAP1Q9H0H5 632 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 WNT5BQ9H1J7 359 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 SRA1Q9HD15 236 aaKnown RBP9.88□□□□□ -0.83
COL28A1-203ENST00000435823 DYNLRB1Q9NP97 96 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 RPRD1BQ9NQG5 326 aaKnown RBP9.88□□□□□ -0.83
COL28A1-203ENST00000435823 ARMC1Q9NVT9 282 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 KIF17Q9P2E2 1029 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 KLHL21Q9UJP4 597 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 GDF2Q9UK05 429 aaPredicted RBP9.88□□□□□ -0.83
COL28A1-203ENST00000435823 CELSR1Q9NYQ6 3014 aa9.88□□□□□ -0.83
COL28A1-203ENST00000435823 HIVEP1P15822 2718 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 IGLV1-36A0A0B4J1U3 117 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 C5orf49A4QMS7 147 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 OR6C68A6NDL8 312 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 GPRIN2O60269 458 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 DOK2O60496 412 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 NDUFS7O75251 213 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 MPZL1O95297 269 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 IFNGP01579 166 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 HLA-DQA2P01906 255 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 SCG5P05408 212 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 LCKP06239 509 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 ERCC1P07992 297 aaPredicted RBP9.87□□□□□ -0.83
COL28A1-203ENST00000435823 IGFBP1P08833 259 aaPredicted RBP9.87□□□□□ -0.83
COL28A1-203ENST00000435823 GAAP10253 952 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 FCGR1AP12314 374 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 FOSL1P15407 271 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 FASP25445 335 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 PCSK6P29122 969 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 PPOXP50336 477 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 SELENOVP59797 346 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 KCNMB1Q16558 191 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 SLC36A3Q495N2 470 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 RGS7BPQ6MZT1 257 aaPredicted RBP9.87□□□□□ -0.83
COL28A1-203ENST00000435823 ZNF774Q6NX45 483 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 SHQ1Q6PI26 577 aaKnown RBP9.87□□□□□ -0.83
COL28A1-203ENST00000435823 ZBTB46Q86UZ6 589 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 OR6V1Q8N148 313 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 PAQR4Q8N4S7 273 aaPredicted RBP9.87□□□□□ -0.83
COL28A1-203ENST00000435823 ATG16L2Q8NAA4 619 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 SLC37A3Q8NCC5 494 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 NPEPL1Q8NDH3 523 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 ICA1LQ8NDH6 482 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 PROKR2Q8NFJ6 384 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 OR2T4Q8NH00 348 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 NRBF2Q96F24 287 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 POM121L2Q96KW2 1035 aa9.87□□□□□ -0.83
COL28A1-203ENST00000435823 VRK1Q99986 396 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms