RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 EMP2P54851 167 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 FBXW4P57775 412 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 TAS2R19P59542 299 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 RAB14P61106 215 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 TSPAN5P62079 268 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 HSF1Q00613 529 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 TLE3Q04726 772 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 MFGE8Q08431 387 aaPredicted RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 SNTA1Q13424 505 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 ETFDHQ16134 617 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 NKAIN1Q4KMZ8 207 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 C1orf100Q5SVJ3 147 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 SLC36A1Q7Z2H8 476 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 HDDC2Q7Z4H3 204 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 ADGRE4PQ86SQ3 457 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 TMEM229BQ8NBD8 167 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 APCDD1LQ8NCL9 501 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 ADPRHL1Q8NDY3 354 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 OR4C16Q8NGL9 310 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 OR1J4Q8NGS1 313 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 GPX8Q8TED1 209 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 CCDC107Q8WV48 283 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 DNAJA3Q96EY1 480 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 SLC25A44Q96H78 314 aaPredicted RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 MRGPRX4Q96LA9 322 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 C5orf34Q96MH7 638 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 FOXN4Q96NZ1 517 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 RBP7Q96R05 134 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 OR2A7Q96R45 310 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 CITED4Q96RK1 184 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 CMKLR1Q99788 373 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 NUDT22Q9BRQ3 303 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 GINS4Q9BRT9 223 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 DUSP23Q9BVJ7 150 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 DPCDQ9BVM2 203 aaPredicted RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 ALX4Q9H161 411 aaPredicted RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 SERINC1Q9NRX5 453 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 TAS2R4Q9NYW5 299 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 SUSD2Q9UGT4 822 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 B3GALT5Q9Y2C3 310 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 PCDHGA5Q9Y5G8 931 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 AUP1Q9Y679 476 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 C5orf42Q9H799 3197 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 MPDZO75970 2070 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 IGHV3-20A0A0C4DH32 117 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 TRBV11-1A0A0K0K1C0 115 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 A0A1W2PNV4 684 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 OR2M5A3KFT3 312 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 M0R233 179 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 ZFAND5O76080 213 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 RGS11O94810 467 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 LPLP06858 475 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 MELTFP08582 738 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 ANXA7P20073 488 aaKnown RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 RAB6AP20340 208 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 ZNF41P51814 821 aaPredicted RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 EFNB2P52799 333 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 P2RX3P56373 397 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 DCDP81605 110 aaKnown RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 PLA2G7Q13093 441 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 NR0B2Q15466 257 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 MPPED2Q15777 294 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 CLLU1Q5K131 121 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 C1QTNF12Q5T7M4 302 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 STEAP1BQ6NZ63 245 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 PAPD4Q6PIY7 484 aaKnown RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 KLHL24Q6TFL4 600 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 DCXRQ7Z4W1 244 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 OR8H3Q8N146 312 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 G6PC2Q9NQR9 355 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 PIPOXQ9P0Z9 390 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 PPP4R1LQ9P1A2 415 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 C19orf25Q9UFG5 118 aaPredicted RBP9.34□□□□□ -0.91
CD44-210ENST00000434472 RARRES3Q9UL19 164 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 EMC9Q9Y3B6 208 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 MAB21L2Q9Y586 359 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 IGLV3-32A0A0A0MS00 114 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 TMEM269A0A1B0GVZ9 245 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 LOC107986453A0A1B0GWG9 222 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 A0A1W2PQ72 361 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 LIPT2A6NK58 231 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 LEUTXA8MZ59 168 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 H3BSH0 61 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 PYCARD-AS1I3L0S3 204 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 SCGNO76038 276 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 WISP1O95388 367 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 FBXO45P0C2W1 286 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 HLA-DOBP13765 273 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 FKBP2P26885 142 aaKnown RBP9.33□□□□□ -0.92
CD44-210ENST00000434472 CXCL12P48061 93 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 MMP16P51512 607 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 POU3F1Q03052 451 aaPredicted RBP9.33□□□□□ -0.92
CD44-210ENST00000434472 FOXF1Q12946 379 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 OPCMLQ14982 345 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 RAB12Q6IQ22 244 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 LRFN4Q6PJG9 635 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 TMEM205Q6UW68 189 aa9.33□□□□□ -0.92
CD44-210ENST00000434472 SHISA6Q6ZSJ9 500 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms