RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GABRPO00591 440 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 NVLO15381 856 aaKnown RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 SLC19A2O60779 497 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 UTS2O95399 124 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 KLF8O95600 359 aaPredicted RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 AIFM1O95831 613 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 PAHP00439 452 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 OTCP00480 354 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 SEMG1P04279 462 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 S100A9P06702 114 aaKnown RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 EIF4EP06730 217 aaKnown RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CLTAP09496 248 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CSF3P09919 207 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 PMCHP20382 165 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 COX7A1P24310 79 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CD82P27701 267 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 GABRR2P28476 465 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 BMI1P35226 326 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CFHR2P36980 270 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 HSD17B2P37059 387 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 AQP2P41181 271 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CX3CR1P49238 355 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 FGF8P55075 233 aaPredicted RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 TAS2R19P59542 299 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 LCN2P80188 198 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF92Q03936 586 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 IFT88Q13099 833 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 ARFRP1Q13795 201 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 RCAN2Q14206 197 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 FZD2Q14332 565 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 FAM83EQ2M2I3 478 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 TRMT5Q32P41 509 aaKnown RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CTRB2Q6GPI1 263 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 WDR74Q6RFH5 385 aaPredicted RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CMC1Q7Z7K0 106 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 LINC00523Q86TU6 105 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 IQCKQ8N0W5 287 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 PNKDQ8N490 385 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 ASCC1Q8N9N2 400 aaKnown RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 TMEM104Q8NE00 496 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 OR4C5Q8NGB2 326 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 OR10G3Q8NGC4 313 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 DTX3LQ8TDB6 740 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 TCP10LQ8TDR4 215 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 LRRC29Q8WV35 223 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 STMN2Q93045 179 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 TOP1MTQ969P6 601 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 C8orf44Q96CB5 159 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 DNAJC19Q96DA6 116 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 FCRL1Q96LA6 429 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF317Q96PQ6 595 aaPredicted RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 XPO6Q96QU8 1125 aaKnown RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 NICN1Q9BSH3 213 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 GABARAPL3Q9BY60 117 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 HAUS4Q9H6D7 363 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 PRSS16Q9NQE7 514 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 DYRK4Q9NR20 520 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CCL28Q9NRJ3 127 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 GPATCH2LQ9NWQ4 482 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 DEC1Q9P2X7 70 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 UXTQ9UBK9 157 aaPredicted RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 CLN8Q9UBY8 286 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 BTNL2Q9UIR0 455 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 ASF1AQ9Y294 204 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 YARS2Q9Y2Z4 477 aaKnown RBP1.87□□□□□ -2.11
PTPN4-205ENST00000433888 HEBP2Q9Y5Z4 205 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 SLC25A15Q9Y619 301 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 COMMD3-BMI1R4GMX3 469 aa1.87□□□□□ -2.11
PTPN4-205ENST00000433888 DENND4AQ7Z401 1863 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 TRBV9A0A0B4J1U6 114 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 A0A1B0GVI7 797 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 A0A1W2PPV4 95 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 FAM25EA8MYX2 175 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 H7C1H1 209 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF701M0R085 212 aaPredicted RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 NUPL2O15504 423 aaKnown RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 TRAF3IP2O43734 574 aaPredicted RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 MGRN1O60291 552 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 FKBP6O75344 327 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 RDH16O75452 317 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CLDN11O75508 207 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 EIF3GO75821 320 aaKnown RBP eCLIP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 FGF1P05230 155 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CRYGCP07315 174 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 GKN3PP0CG01 181 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CHTF8P0CG12 524 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CALM1P0DP23 149 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CALM2P0DP24 149 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CALM3P0DP25 149 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CTRB1P17538 263 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 GGT1P19440 569 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 TBPP20226 339 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 OTX1P32242 354 aaPredicted RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 RFC3P40938 356 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 GLP1RP43220 463 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 BTDP43251 543 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 SP4Q02446 784 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 DMTNQ08495 405 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms