RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 SLC41A3Q96GZ6 507 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 GMPPAQ96IJ6 420 aaPredicted RBP3.41□□□□□ -1.86
HMGB3-203ENST00000430118 AGAP4Q96P64 663 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 SORT1Q99523 831 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 SERPINI1Q99574 410 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 C12orf57Q99622 126 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 EPYCQ99645 322 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 MRPL45Q9BRJ2 306 aaKnown RBP3.41□□□□□ -1.86
HMGB3-203ENST00000430118 SEC22CQ9BRL7 303 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 TMEM246Q9BRR3 403 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 CNPY3Q9BT09 278 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 TRIM62Q9BVG3 475 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 DDA1Q9BW61 102 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 CHID1Q9BWS9 393 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 OSBPL11Q9BXB4 747 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 YTHDF1Q9BYJ9 559 aaKnown RBP3.41□□□□□ -1.86
HMGB3-203ENST00000430118 CSNK1G1Q9HCP0 422 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 RPRD1BQ9NQG5 326 aaKnown RBP3.41□□□□□ -1.86
HMGB3-203ENST00000430118 FBXO8Q9NRD0 319 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 GLRX2Q9NS18 164 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 CMTM6Q9NX76 183 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 COA4Q9NYJ1 87 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 WWOXQ9NZC7 414 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 CCDC59Q9P031 241 aaKnown RBP3.41□□□□□ -1.86
HMGB3-203ENST00000430118 EMCNQ9ULC0 261 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 PSMD13Q9UNM6 376 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 PPP1R3CQ9UQK1 317 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 MRPS33Q9Y291 106 aaKnown RBP3.41□□□□□ -1.86
HMGB3-203ENST00000430118 PLLPQ9Y342 182 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 SNX24Q9Y343 169 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 FKBP7Q9Y680 259 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 U3KQA8 63 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 SPTBN1Q01082 2364 aaKnown RBP3.41□□□□□ -1.86
HMGB3-203ENST00000430118 TLN1Q9Y490 2541 aaKnown RBP3.41□□□□□ -1.86
HMGB3-203ENST00000430118 FBN3Q75N90 2809 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 SCN1AP35498 2009 aa3.41□□□□□ -1.86
HMGB3-203ENST00000430118 MYO18AQ92614 2054 aaKnown RBP3.4□□□□□ -1.86
HMGB3-203ENST00000430118 CABIN1Q9Y6J0 2220 aa3.4□□□□□ -1.86
HMGB3-203ENST00000430118 MYH10P35580 1976 aa3.4□□□□□ -1.86
HMGB3-203ENST00000430118 MYH11P35749 1972 aa3.4□□□□□ -1.86
HMGB3-203ENST00000430118 A0A0G2JMP0 313 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 A0A1W2PNU3 283 aaPredicted RBP3.4□□□□□ -1.87
HMGB3-203ENST00000430118 LRIT2A6NDA9 550 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 RNF212BA8MTL3 300 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 LINC00587B1AMM8 73 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 PGRMC1O00264 195 aaKnown RBP3.4□□□□□ -1.87
HMGB3-203ENST00000430118 KPNA3O00505 521 aaPredicted RBP3.4□□□□□ -1.87
HMGB3-203ENST00000430118 SDHDO14521 159 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 EI24O14681 340 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 TM9SF1O15321 606 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 KCNAB3O43448 404 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 RAD1O60671 282 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 TBL1XO60907 577 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 CCNKO75909 580 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 SEMA3DO95025 777 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 CCNB2O95067 398 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 NXPH4O95158 308 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 MT-ND1P03886 318 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 OPN1LWP04000 364 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 S100A8P05109 93 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 GIMD1P0DJR0 217 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ANXA8P13928 327 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 CD1EP15812 388 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ZP3P21754 424 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 S100PP25815 95 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ERP29P30040 261 aaKnown RBP3.4□□□□□ -1.87
HMGB3-203ENST00000430118 DRD3P35462 400 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ETV5P41161 510 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 HTR2BP41595 481 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 CCT3P49368 545 aaKnown RBP3.4□□□□□ -1.87
HMGB3-203ENST00000430118 METAP1P53582 386 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 CDH6P55285 790 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 RPS21P63220 83 aaKnown RBP3.4□□□□□ -1.87
HMGB3-203ENST00000430118 INCA1Q0VD86 236 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 CDH17Q12864 832 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 BNIP2Q12982 314 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 PMS2P3Q13401 168 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 PEX6Q13608 980 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 DPYSL2Q16555 572 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ZNF181Q2M3W8 571 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 DEFB109BQ30KR1 87 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 MAJINQ3KP22 176 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ZFP69Q49AA0 526 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 C14orf28Q4W4Y0 310 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 C9orf64Q5T6V5 341 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ANXA8L1Q5VT79 327 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 UBE2UQ5VVX9 321 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ERICH5Q6P6B1 374 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 WDR59Q6PJI9 974 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 SCARA5Q6ZMJ2 495 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 OTOGQ6ZRI0 2925 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 Q6ZSR6 202 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 CLEC20AQ6ZU45 233 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ERASQ7Z444 233 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 UNC93AQ86WB7 457 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 CARM1Q86X55 608 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 HIPK1Q86Z02 1210 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 ZNF683Q8IZ20 524 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 SLC22A18ASQ8N1D0 253 aa3.4□□□□□ -1.87
HMGB3-203ENST00000430118 STK40Q8N2I9 435 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms