RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SPOCK1Q08629 439 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 SLC35D3Q5M8T2 416 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF691Q5VV52 312 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 NXNL2Q5VZ03 156 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 PAPD5Q8NDF8 572 aaKnown RBP11.67□□□□□ -0.54
PTCH1-207ENST00000429896 SYNPRQ8TBG9 265 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 LANCL2Q9NS86 450 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 WDR81Q562E7 1941 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 TSPAN15O95858 294 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 IFNA1P01562 189 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 RPS23P62266 143 aaKnown RBP11.67□□□□□ -0.54
PTCH1-207ENST00000429896 FGL1Q08830 312 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 SFRP5Q5T4F7 317 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 Q6ZPB1 254 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-207ENST00000429896 CA5BP1Q8WTZ4 195 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 BORCS7Q96B45 105 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 LGALS12Q96DT0 336 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 TUSC2O75896 110 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF44P15621 663 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 RAB3AP20336 220 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 ARR3P36575 388 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 CASP3P42574 277 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 RAC1P63000 192 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 CCDC71Q8IV32 467 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-207ENST00000429896 ACBD4Q8NC06 268 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 GJC3Q8NFK1 279 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 GPR148Q8TDV2 347 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 POTEKPQ9BYX7 375 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 HS3ST3B1Q9Y662 390 aa11.67□□□□□ -0.54
PTCH1-207ENST00000429896 SDHAP31040 664 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 KHDC1LQ5JSQ8 128 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 COMMD7Q86VX2 200 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 GLB1L2Q8IW92 636 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 DUS3LQ96G46 650 aaKnown RBP11.66□□□□□ -0.54
PTCH1-207ENST00000429896 GNB4Q9HAV0 340 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 ENPP5Q9UJA9 477 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 TP53TG5Q9Y2B4 290 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 CREBL2O60519 120 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-207ENST00000429896 FZD7O75084 574 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 LINC00346Q8IVM7 164 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 ADAMTS14Q8WXS8 1223 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 KISS1RQ969F8 398 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-207ENST00000429896 SLC35B4Q969S0 331 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 C4orf36Q96KX1 117 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 HRH3Q9Y5N1 445 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 MYOFQ9NZM1 2061 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 M0R1B8 84 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 ACTL6AO96019 429 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 SHBQ15464 509 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 C9orf152Q5JTZ5 239 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 ATP1A1-AS1Q5TC04 95 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 MSRB3Q8IXL7 192 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 SPARTQ8N0X7 666 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 PHB2Q99623 299 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 A0A087WUJ7 227 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 COX6A1P12074 109 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 ADH6P28332 368 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 BCL2A1Q16548 175 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 NHSL2Q5HYW2 709 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 TMEM99Q8N816 258 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 OR4K15Q8NH41 348 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 PRR7Q8TB68 274 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 LIPHQ8WWY8 451 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 TUBG2Q9NRH3 451 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 TIMM10BQ9Y5J6 103 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 A0A0B4J2E0 115 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 A0A1B0GX12 115 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 A0A1W2PQL4 384 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-207ENST00000429896 IFNA17P01571 189 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 MT-ND4P03905 459 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 CELA2AP08217 269 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-207ENST00000429896 AGTR1P30556 359 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 CD96P40200 585 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 EXTL1Q92935 676 aa11.66□□□□□ -0.54
PTCH1-207ENST00000429896 CNOT2Q9NZN8 540 aaKnown RBP11.66□□□□□ -0.54
PTCH1-207ENST00000429896 IGHV3-64DA0A0J9YX35 117 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 ARPC5O15511 151 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 RPL35P42766 123 aaKnown RBP11.65□□□□□ -0.54
PTCH1-207ENST00000429896 TEKQ02763 1124 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 PAN3Q58A45 887 aaKnown RBP11.65□□□□□ -0.54
PTCH1-207ENST00000429896 DGAT2L6Q6ZPD8 337 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 H1FXQ92522 213 aaKnown RBP11.65□□□□□ -0.54
PTCH1-207ENST00000429896 TXNIPQ9H3M7 391 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 ACOT13Q9NPJ3 140 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 NDRG4Q9ULP0 352 aaKnown RBP11.65□□□□□ -0.54
PTCH1-207ENST00000429896 BCAS1O75363 584 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-207ENST00000429896 GLCEO94923 617 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 GPR50Q13585 617 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 HEPHL1Q6MZM0 1159 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 FAM198BQ6UWH4 519 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 ARIH2OSQ8N7S6 290 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 OR11L1Q8NGX0 322 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 OR10D3Q8NH80 312 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 KTI12Q96EK9 354 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF582Q96NG8 517 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-207ENST00000429896 PFDN5Q99471 154 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 C1QTNF6Q9BXI9 259 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms