RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 RGS6P49758 472 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 SNRPGP62308 76 aaKnown RBP8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 SGCAQ16586 387 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 ARMCX4Q5H9R4 360 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 LIX1LQ8IVB5 337 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 STX19Q8N4C7 294 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 KBTBD8Q8NFY9 601 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR6N2Q8NGY6 317 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 GATAD2BQ8WXI9 593 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC25A44Q96H78 314 aaPredicted RBP8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 NMNAT2Q9BZQ4 307 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 PRDM14Q9GZV8 571 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 CLCF1Q9UBD9 225 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 MCTS1Q9ULC4 181 aaKnown RBP8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 OSGIN2Q9Y236 505 aa8.4□□□□□ -1.07
HMGCLL1-206ENST00000428842 IGLV1-36A0A0B4J1U3 117 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 TRGV8A0A0C4DH27 118 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 A0A1W2PNV4 684 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 C12orf71A8MTZ7 269 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 PRODHO43272 600 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 SPARCP09486 303 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 PIPP12273 146 aaPredicted RBP8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 AGTR1P30556 359 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 ETV6P41212 452 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 PER3P56645 1201 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF45Q02386 682 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 KLRB1Q12918 225 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 CEACAM16Q2WEN9 425 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 TP53I3Q53FA7 332 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 NXNL2Q5VZ03 156 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 MEPCEQ7L2J0 689 aaKnown RBP8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 NAA40Q86UY6 237 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 FJX1Q86VR8 437 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR51E2Q9H255 320 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 RNF122Q9H9V4 155 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 H2AFY2Q9P0M6 372 aaPredicted RBP8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 NOX1Q9Y5S8 564 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 A0A1B0GVC2 190 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 RER1O15258 196 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 EIF1BO60739 113 aaKnown RBP8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 MRPL33O75394 65 aaKnown RBP8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 RPP14O95059 124 aaKnown RBP8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 HMGN1P05114 100 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC2A1P11166 492 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 LAP3P28838 519 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 KIR2DL2P43627 348 aaPredicted RBP8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR12D2P58182 307 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 HIKESHIQ53FT3 197 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 NOXO1Q8NFA2 376 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 PRR7Q8TB68 274 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 SARAFQ96BY9 339 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 ORAI1Q96D31 301 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 RNF167Q9H6Y7 350 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 QPCTLQ9NXS2 382 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 GLTPQ9NZD2 209 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 FBXL3Q9UKT7 428 aa8.39□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF593O00488 134 aaPredicted RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 CRYABP02511 175 aaKnown RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 LIMS3P0CW19 117 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 LIMS4P0CW20 117 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 CSNK1A1P48729 337 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ADAM8P78325 824 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZP4Q12836 540 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 MED22Q15528 200 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 RPL13AP3Q6NVV1 102 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 KLHL24Q6TFL4 600 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 LRRN1Q6UXK5 716 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ADGRE4PQ86SQ3 457 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ATCAYQ86WG3 371 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 MCEMP1Q8IX19 187 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 THEM6Q8WUY1 208 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 C11orf40Q8WZ69 217 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 TMEM203Q969S6 136 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 DCLRE1CQ96SD1 692 aaKnown RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 NKX3-1Q99801 234 aaPredicted RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF649Q9BS31 505 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 NAA11Q9BSU3 229 aaPredicted RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 CENPOQ9BU64 300 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 POLE4Q9NR33 117 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ASH2LQ9UBL3 628 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 SIRT4Q9Y6E7 314 aaPredicted RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 DOPEY1Q5JWR5 2465 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 A6NIN4 97 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 TNFSF13O75888 250 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 KRT33AO76009 404 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 TXNDC12O95881 172 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 IGF2P01344 180 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 IFNGP01579 166 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 IGHG1P01857 330 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 HLA-HP01893 362 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 YES1P07947 543 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 DBHP09172 617 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 HTR1FP30939 366 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 EIF2B2P49770 351 aaKnown RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 DAP3P51398 398 aaKnown RBP8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 MAP2K6P52564 334 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF85Q03923 595 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 MFSD13AQ14CX5 517 aa8.38□□□□□ -1.07
HMGCLL1-206ENST00000428842 OCLNQ16625 522 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms