RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ALDH3A2P51648 485 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 RAD23AP54725 363 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 PPP2R2BQ00005 443 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 PSG4Q00888 419 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 NAAAQ02083 359 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 ENDOGQ14249 297 aaKnown RBP12.65□□□□□ -0.38
SGCE-204ENST00000428696 C1QTNF12Q5T7M4 302 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 LPCAT4Q643R3 524 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 CORO6Q6QEF8 472 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 OR2AJ1Q8NGZ0 328 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 ZNRF4Q8WWF5 429 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 SNX18Q96RF0 628 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 IL4I1Q96RQ9 567 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 SLC29A1Q99808 456 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 HCAR1Q9BXC0 346 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 PRRG3Q9BZD7 231 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 SLC25A19Q9HC21 320 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 H2AFY2Q9P0M6 372 aaPredicted RBP12.65□□□□□ -0.38
SGCE-204ENST00000428696 EDARQ9UNE0 448 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 CACNA1DQ01668 2161 aa12.65□□□□□ -0.38
SGCE-204ENST00000428696 NBPF19A0A087WUL8 3843 aa12.65□□□□□ -0.39
SGCE-204ENST00000428696 TLX2O43763 284 aaPredicted RBP12.64□□□□□ -0.39
SGCE-204ENST00000428696 MGRN1O60291 552 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 PTHP01270 115 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 IGKV3-15P01624 115 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 ALPLP05186 524 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 ADAM8P78325 824 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 GALK2Q01415 458 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 KEAP1Q14145 624 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
SGCE-204ENST00000428696 KRT80Q6KB66 452 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 ZNF774Q6NX45 483 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 LYPD4Q6UWN0 246 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 CXXC5Q7LFL8 322 aaKnown RBP12.64□□□□□ -0.39
SGCE-204ENST00000428696 ZBTB46Q86UZ6 589 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 LINC00346Q8IVM7 164 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 FAM169BQ8N8A8 192 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 TCEANCQ8N8B7 351 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 SLC30A7Q8NEW0 376 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 IL17RDQ8NFM7 739 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 PTP4A1Q93096 173 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 DDOQ99489 341 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 RACGAP1Q9H0H5 632 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 PLEKHF2Q9H8W4 249 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 CDH20Q9HBT6 801 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 CRNNQ9UBG3 495 aaPredicted RBP12.64□□□□□ -0.39
SGCE-204ENST00000428696 PLEKHA6Q9Y2H5 1048 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 ABCA4P78363 2273 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 NOTCH2Q04721 2471 aa12.64□□□□□ -0.39
SGCE-204ENST00000428696 LRBAP50851 2863 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 C5orf49A4QMS7 147 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 ZAR1LA6NP61 321 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 CYSRT1A8MQ03 144 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 SHISA9B4DS77 424 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 HS3ST1O14792 307 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 PRKYO43930 277 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 TFP02787 698 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 MMP7P09237 267 aaPredicted RBP12.63□□□□□ -0.39
SGCE-204ENST00000428696 SPARCP09486 303 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 ZNF14P17017 642 aaPredicted RBP12.63□□□□□ -0.39
SGCE-204ENST00000428696 STOMP27105 288 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 CALCRP30988 508 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 RPS27P42677 84 aaKnown RBP12.63□□□□□ -0.39
SGCE-204ENST00000428696 GDI2P50395 445 aaKnown RBP12.63□□□□□ -0.39
SGCE-204ENST00000428696 FABP6P51161 128 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 SLC25A1P53007 311 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 LSM6P62312 80 aaKnown RBP12.63□□□□□ -0.39
SGCE-204ENST00000428696 SCRN3Q0VDG4 424 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 B3GLCTQ6Y288 498 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 FOXL2NBQ6ZUU3 175 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 CPEB3Q8NE35 698 aaKnown RBP12.63□□□□□ -0.39
SGCE-204ENST00000428696 SLC26A10Q8NG04 563 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 OR1J2Q8NGS2 313 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 LILRB1Q8NHL6 650 aaPredicted RBP12.63□□□□□ -0.39
SGCE-204ENST00000428696 PITX2Q99697 317 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 TMEM204Q9BSN7 226 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 OR2H1Q9GZK4 316 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 WNT5BQ9H1J7 359 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 TOR3AQ9H497 397 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 DCLRE1BQ9H816 532 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 IMPAD1Q9NX62 359 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 PLEK2Q9NYT0 353 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 ITGB1BP2Q9UKP3 347 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 FBXL3Q9UKT7 428 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 SPEF1Q9Y4P9 236 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 FBN2P35556 2912 aa12.63□□□□□ -0.39
SGCE-204ENST00000428696 IGHV2OR16-5A0A0B4J2B6 119 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 E7EQL1 145 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 ZNF593O00488 134 aaPredicted RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 RER1O15258 196 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 SGCEO43556 437 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 TMCC2O75069 709 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 FAM157BP0CG42 384 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 GSTT1P30711 240 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 HTR5AP47898 357 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 AQP6Q13520 282 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 APOFQ13790 326 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 TBC1D28Q2M2D7 210 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms