RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZNF69Q9UC07 566 aa13.98□□□□□ -0.17
VARS-216ENST00000428445 RIMS3Q9UJD0 308 aa13.98□□□□□ -0.17
VARS-216ENST00000428445 BAG5Q9UL15 447 aa13.98□□□□□ -0.17
VARS-216ENST00000428445 PLSCR5A0PG75 271 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 GMNCA6NCL1 334 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 TSPAN19P0C672 248 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 THRBP10828 461 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 FPR2P25090 351 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 DAP3P51398 398 aaKnown RBP13.97□□□□□ -0.17
VARS-216ENST00000428445 TAF11Q15544 211 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 KLF17Q5JT82 389 aaPredicted RBP13.97□□□□□ -0.17
VARS-216ENST00000428445 OTPQ5XKR4 325 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 MICU2Q8IYU8 434 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 DEFB108BQ8NET1 73 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 FNDC8Q8TC99 324 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 ST7LQ8TDW4 575 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 TMEM239Q8WW34 195 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 LRRC58Q96CX6 371 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 C1orf147Q96MC9 270 aaPredicted RBP13.97□□□□□ -0.17
VARS-216ENST00000428445 ZNF48Q96MX3 618 aaPredicted RBP13.97□□□□□ -0.17
VARS-216ENST00000428445 OR2H1Q9GZK4 316 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 NPTNQ9Y639 398 aa13.97□□□□□ -0.17
VARS-216ENST00000428445 IGHV3OR16-10A0A075B7F0 116 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 HMGB1P1B2RPK0 211 aaPredicted RBP13.96□□□□□ -0.17
VARS-216ENST00000428445 FBP2O00757 339 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 IGHV2-70P01814 119 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 HKR1P10072 659 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 LIPAP38571 399 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 TNFAIP6P98066 277 aaPredicted RBP13.96□□□□□ -0.17
VARS-216ENST00000428445 PSG7Q13046 419 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 RABL3Q5HYI8 236 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 FAM27BQ5VT28 67 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 NANOGP8Q6NSW7 305 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 ZNF747Q9BV97 191 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 EGLN1Q9GZT9 426 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 TXNIPQ9H3M7 391 aa13.96□□□□□ -0.17
VARS-216ENST00000428445 A0A1W2PPL8 197 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 DNAJC9-AS1A6NH13 148 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 OR5F1O95221 314 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 GATA3P23771 443 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 ENDOGQ14249 297 aaKnown RBP13.95□□□□□ -0.18
VARS-216ENST00000428445 TTMPQ5BVD1 217 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 COQ5Q5HYK3 327 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 ERICH5Q6P6B1 374 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 Q6ZR03 302 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 OR8J3Q8NGG0 315 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 C4orf45Q96LM5 186 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 ECSITQ9BQ95 431 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 NTN4Q9HB63 628 aa13.95□□□□□ -0.18
VARS-216ENST00000428445 PURGQ9UJV8 347 aaKnown RBP13.95□□□□□ -0.18
VARS-216ENST00000428445 H7C1C5 153 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 TIMM8AO60220 97 aaPredicted RBP13.94□□□□□ -0.18
VARS-216ENST00000428445 FOXH1O75593 365 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 ZNF205O95201 554 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 IFNA8P32881 189 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 GUCA1AP43080 201 aaPredicted RBP13.94□□□□□ -0.18
VARS-216ENST00000428445 YAP1P46937 504 aaKnown RBP13.94□□□□□ -0.18
VARS-216ENST00000428445 ERFP50548 548 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 CTXN1P60606 82 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 LCN6P62502 163 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 ZNF154Q13106 437 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 CDK5R2Q13319 367 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 ANKDD1AQ495B1 522 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 ALG10Q5BKT4 473 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 CALHM3Q86XJ0 350 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 TREML1Q86YW5 311 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 ALDH16A1Q8IZ83 802 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 OR2Z1Q8NG97 314 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 WACQ9BTA9 647 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 EMC7Q9NPA0 242 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 CYSLTR2Q9NS75 346 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 TMEM106BQ9NUM4 274 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 CGGBP1Q9UFW8 167 aaPredicted RBP13.94□□□□□ -0.18
VARS-216ENST00000428445 NUP50Q9UKX7 468 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 MED31Q9Y3C7 131 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 TIMM10BQ9Y5J6 103 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 AUP1Q9Y679 476 aa13.94□□□□□ -0.18
VARS-216ENST00000428445 TRAV27A0A087WT01 109 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 H3BSA7 217 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 EDF1O60869 148 aaKnown RBP13.93□□□□□ -0.18
VARS-216ENST00000428445 CD55P08174 381 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 ADH4P08319 380 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 CST2P09228 141 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 IFI30P13284 250 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 TUBG1P23258 451 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 PRTN3P24158 256 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 SLC6A9P48067 706 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 RPL27P61353 136 aaKnown RBP13.93□□□□□ -0.18
VARS-216ENST00000428445 SLC3A1Q07837 685 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■■■■■ 36.5
VARS-216ENST00000428445 FOXL1Q12952 345 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 BAMBIQ13145 260 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 TUSC1Q2TAM9 212 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 ARMCX4Q5H9R4 360 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 MTX3Q5HYI7 312 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 PRR31Q5SQ13 230 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 RBMS3Q6XE24 437 aaKnown RBP13.93□□□□□ -0.18
VARS-216ENST00000428445 DOK3Q7L591 496 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 LRRC75AQ8NAA5 344 aa13.93□□□□□ -0.18
VARS-216ENST00000428445 OR51A7Q8NH64 312 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms