RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 GGTLC2Q14390 218 aa16.41■□□□□ 0.22
COL9A2-204ENST00000427563 ALKBH6Q3KRA9 238 aa16.41■□□□□ 0.22
COL9A2-204ENST00000427563 RGS7BPQ6MZT1 257 aaPredicted RBP16.41■□□□□ 0.22
COL9A2-204ENST00000427563 CYP2R1Q6VVX0 501 aa16.41■□□□□ 0.22
COL9A2-204ENST00000427563 ZNF786Q8N393 782 aa16.41■□□□□ 0.22
COL9A2-204ENST00000427563 GTF3AQ92664 365 aaKnown RBP16.41■□□□□ 0.22
COL9A2-204ENST00000427563 PIMREGQ9BSJ6 248 aa16.41■□□□□ 0.22
COL9A2-204ENST00000427563 SOX7Q9BT81 388 aa16.41■□□□□ 0.22
COL9A2-204ENST00000427563 VSX1Q9NZR4 365 aaPredicted RBP16.41■□□□□ 0.22
COL9A2-204ENST00000427563 DUSP13Q9UII6 198 aa16.41■□□□□ 0.22
COL9A2-204ENST00000427563 FBXO9Q9UK97 447 aaPredicted RBP16.41■□□□□ 0.22
COL9A2-204ENST00000427563 IER3IP1Q9Y5U9 82 aa16.41■□□□□ 0.22
COL9A2-204ENST00000427563 MPZL1O95297 269 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 TXNDC12O95881 172 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 TP53P04637 393 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-204ENST00000427563 NAT2P11245 290 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 MSR1P21757 451 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 APLNRP35414 380 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 MS4A2Q01362 244 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 RIN1Q13671 783 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 ZNF774Q6NX45 483 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 PGM2L1Q6PCE3 622 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 ZDHHC21Q8IVQ6 265 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 OR1J2Q8NGS2 313 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 UBASH3BQ8TF42 649 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 SYT4Q9H2B2 425 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 ACTR3BQ9P1U1 418 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 AURKCQ9UQB9 309 aa16.4■□□□□ 0.22
COL9A2-204ENST00000427563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL9A2-204ENST00000427563 DCTN6O00399 190 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 SOCS2O14508 198 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 AHCYL1O43865 530 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 PPP1R3DO95685 299 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 GPANK1O95872 356 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 PTHP01270 115 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 LCKP06239 509 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 ZNF16P17020 682 aaPredicted RBP16.39■□□□□ 0.21
COL9A2-204ENST00000427563 CCNOP22674 350 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 COL8A2P25067 703 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 GSSP48637 474 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 GPR139Q6DWJ6 353 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 SMARCD3Q6STE5 483 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 DPY19L2P2Q6ZN68 376 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 RFPL4BQ6ZWI9 263 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 ASRGL1Q7L266 308 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 YIPF5Q969M3 257 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 KCNN2Q9H2S1 579 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 TAAR3PQ9P1P4 343 aa16.39■□□□□ 0.21
COL9A2-204ENST00000427563 A0A1W2PPW3 197 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 C5orf49A4QMS7 147 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 LRP5LA4QPB2 252 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 XKRYO14609 159 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 SLC16A7O60669 478 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 LILRA1O75019 489 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 NGFP01138 241 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 FPR3P25089 353 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 IL2RGP31785 369 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 MPV17P39210 176 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 MAGEA2P43356 314 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 MAGEB1P43366 347 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 TRIP10Q15642 601 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 SPATA46Q5T0L3 261 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 C1orf94Q6P1W5 598 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 PGBD2Q6P3X8 592 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 OR4C15Q8NGM1 316 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 OR1J1Q8NGS3 322 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 SYNPRQ8TBG9 265 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 FANK1Q8TC84 345 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 MCUR1Q96AQ8 359 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 CCDC124Q96CT7 223 aaKnown RBP16.38■□□□□ 0.21
COL9A2-204ENST00000427563 MARS2Q96GW9 593 aaKnown RBP16.38■□□□□ 0.21
COL9A2-204ENST00000427563 TSSK2Q96PF2 358 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 BCL2L14Q9BZR8 327 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 NUAK2Q9H093 628 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 OR52D1Q9H346 318 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 MS4A5Q9H3V2 200 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 VNN3Q9NY84 501 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 COA3Q9Y2R0 106 aaPredicted RBP16.38■□□□□ 0.21
COL9A2-204ENST00000427563 TIMM10BQ9Y5J6 103 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 LYVE1Q9Y5Y7 322 aa16.38■□□□□ 0.21
COL9A2-204ENST00000427563 A8MV72 311 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-204ENST00000427563 ICMTO60725 284 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 TACSTD2P09758 323 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 ZNF23P17027 643 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 RAD52P43351 418 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 HMGA2P52926 109 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 KLF3P57682 345 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-204ENST00000427563 SMIM11AP58511 58 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 TRIM25Q14258 630 aaKnown RBP16.37■□□□□ 0.21
COL9A2-204ENST00000427563 RFX4Q33E94 735 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 LCN8Q6JVE9 175 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 SYT9Q86SS6 491 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 HIPK1Q86Z02 1210 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 ICA1LQ8NDH6 482 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 OR9Q2Q8NGE9 314 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 MSI2Q96DH6 328 aaKnown RBP16.37■□□□□ 0.21
COL9A2-204ENST00000427563 SAMD8Q96LT4 415 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 MUC13Q9H3R2 512 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 POFUT1Q9H488 388 aa16.37■□□□□ 0.21
COL9A2-204ENST00000427563 OR10H3O60404 316 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms