RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CXCR4P61073 352 aa13.48□□□□□ -0.25
COL11A1-204ENST00000427239 ADAM8P78325 824 aa13.48□□□□□ -0.25
COL11A1-204ENST00000427239 PCK2Q16822 640 aa13.48□□□□□ -0.25
COL11A1-204ENST00000427239 TIGD4Q8IY51 512 aa13.48□□□□□ -0.25
COL11A1-204ENST00000427239 WDR76Q9H967 626 aa13.48□□□□□ -0.25
COL11A1-204ENST00000427239 CYB5R1Q9UHQ9 305 aa13.48□□□□□ -0.25
COL11A1-204ENST00000427239 COMMD3-BMI1R4GMX3 469 aa13.48□□□□□ -0.25
COL11A1-204ENST00000427239 UBL3O95164 117 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 CCKARP32238 428 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 ARR3P36575 388 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 ENTPD1P49961 510 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 AQP6Q13520 282 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 MEP1BQ16820 701 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 KLHL22Q53GT1 634 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 C6orf141Q5SZD1 244 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 UGT2A3Q6UWM9 527 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 B3GLCTQ6Y288 498 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 SHFQ7M4L6 423 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 SLC16A9Q7RTY1 509 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 ERI1Q8IV48 349 aaKnown RBP13.47□□□□□ -0.25
COL11A1-204ENST00000427239 WDR31Q8NA23 367 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 GJC3Q8NFK1 279 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 HTRA1Q92743 480 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 EMC7Q9NPA0 242 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 PLCXD1Q9NUJ7 323 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 MRPS18AQ9NVS2 196 aaKnown RBP13.47□□□□□ -0.25
COL11A1-204ENST00000427239 B3GNT2Q9NY97 397 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 PCDHGB1Q9Y5G3 927 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 CAPZA2P47755 286 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 RAB1AP62820 205 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 RAB40BQ12829 278 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 ENDOGQ14249 297 aaKnown RBP13.47□□□□□ -0.25
COL11A1-204ENST00000427239 SMN1Q16637 294 aaKnown RBP13.47□□□□□ -0.25
COL11A1-204ENST00000427239 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-204ENST00000427239 FAM169BQ8N8A8 192 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 OR2AJ1Q8NGZ0 328 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 FBXO17Q96EF6 278 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 CNN2Q99439 309 aaKnown RBP13.47□□□□□ -0.25
COL11A1-204ENST00000427239 MNTQ99583 582 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 YIPF3Q9GZM5 350 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 CCNB1IP1Q9NPC3 277 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 ZNF224Q9NZL3 707 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 ASH2LQ9UBL3 628 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 POLR1DQ9Y2S0 133 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 SLC25A15Q9Y619 301 aa13.47□□□□□ -0.25
COL11A1-204ENST00000427239 GCN1Q92616 2671 aaKnown RBP13.46□□□□□ -0.25
COL11A1-204ENST00000427239 TUBAL3A6NHL2 446 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 HLA-HP01893 362 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 SBK2P0C263 348 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 DBTP11182 482 aaKnown RBP13.46□□□□□ -0.25
COL11A1-204ENST00000427239 CD79AP11912 226 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 GRNP28799 593 aaKnown RBP13.46□□□□□ -0.25
COL11A1-204ENST00000427239 ZNF91Q05481 1191 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 SCRN3Q0VDG4 424 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 PPA1Q15181 289 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 TAB1Q15750 504 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 GSG1Q2KHT4 349 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 TMEM53Q6P2H8 277 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 LYPD4Q6UWN0 246 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 DPY19L4Q7Z388 723 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 ALDH16A1Q8IZ83 802 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 OR51G2Q8NGK0 314 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 OR52N5Q8NH56 324 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 RNFT2Q96EX2 444 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 WFIKKN1Q96NZ8 548 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 MED18Q9BUE0 208 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 RNF121Q9H920 327 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 ADGRL4Q9HBW9 690 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 AMBNQ9NP70 447 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 NPDC1Q9NQX5 325 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-204ENST00000427239 FBXL3Q9UKT7 428 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 LHFPL6Q9Y693 200 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 TMEM14AQ9Y6G1 99 aa13.46□□□□□ -0.25
COL11A1-204ENST00000427239 IRGMA1A4Y4 181 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 FADS2O95864 444 aaKnown RBP13.45□□□□□ -0.26
COL11A1-204ENST00000427239 MMP7P09237 267 aaPredicted RBP13.45□□□□□ -0.26
COL11A1-204ENST00000427239 RNF224P0DH78 156 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 CBR1P16152 277 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 NUDT6P53370 316 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 PIGFQ07326 219 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 LAIR2Q6ISS4 152 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 RHOUQ7L0Q8 258 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 BPIFB6Q8NFQ5 453 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 OR6N2Q8NGY6 317 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 OTOSQ8NHW6 89 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 DACH2Q96NX9 599 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 NGBQ9NPG2 151 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 SCN3BQ9NY72 215 aa13.45□□□□□ -0.26
COL11A1-204ENST00000427239 EXOGQ9Y2C4 368 aaKnown RBP13.45□□□□□ -0.26
COL11A1-204ENST00000427239 SELENOFO60613 162 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 RAB36O95755 333 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 PTHP01270 115 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 SPARCP09486 303 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 CCDC159P0C7I6 412 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 OR2T7P0C7T2 308 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 ZNF32P17041 273 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 NAA10P41227 235 aaPredicted RBP13.44□□□□□ -0.26
COL11A1-204ENST00000427239 SLC15A1P46059 708 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms