RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 BST2Q10589 180 aaKnown RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 ECH1Q13011 328 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 AQP6Q13520 282 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 FZD2Q14332 565 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 PRPSAP1Q14558 356 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF77Q15935 545 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 GUCA2BQ16661 112 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 TMEM183BQ1AE95 376 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 OR52W1Q6IF63 320 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 RNASEKQ6P5S7 137 aaKnown RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 CCDC73Q6ZRK6 1079 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 TAS2R42Q7RTR8 314 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 LINC01551Q86U37 167 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 SLC22A9Q8IVM8 553 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 TMEM183AQ8IXX5 376 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 MREGQ8N565 214 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 DUSP18Q8NEJ0 188 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 KCNG3Q8TAE7 436 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 SLC22A8Q8TCC7 542 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 MARCH1Q8TCQ1 289 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 TUBGCP3Q96CW5 907 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 ASB9Q96DX5 294 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 AURKBQ96GD4 344 aaPredicted RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 TPD52L3Q96J77 140 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 CEP170P1Q96L14 293 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 TAAR1Q96RJ0 339 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 FAIM2Q9BWQ8 316 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 GABARAPL3Q9BY60 117 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 PLA2G2FQ9BZM2 168 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 DNTTIP1Q9H147 329 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 CTPS2Q9NRF8 586 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 ETNK2Q9NVF9 386 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 STOX2Q9P2F5 926 aaPredicted RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 KLK12Q9UKR0 248 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 NFASCO94856 1347 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 CCDC171Q6TFL3 1326 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 CDHR2Q9BYE9 1310 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 COL16A1Q07092 1604 aaPredicted RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 PALLDQ8WX93 1383 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 MED23Q9ULK4 1368 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 TNS2Q63HR2 1409 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 NRAPQ86VF7 1730 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 TAF1LQ8IZX4 1826 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 A0A0B4J2A0 478 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 A0A1B0GVI7 797 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 A0A1W2PPE3 182 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 A0A1W2PPV9 198 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 F6UB75 175 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 UBXN8O00124 270 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 PEX7O00628 323 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 DLGAP1O14490 977 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 KMOO15229 486 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 CD5LO43866 347 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 SS18L1O75177 396 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 UPK3AO75631 287 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 SNX4O95219 450 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 UQCRFS1P1P0C7P4 283 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 IGHV3-43DP0DP04 118 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 TROVE2P10155 538 aaKnown RBP eCLIP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF30P17039 623 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 EIF2S2P20042 333 aaKnown RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 PBLDP30039 288 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 VHLP40337 213 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 CXCL5P42830 114 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 CRYBB2P43320 205 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 PPOXP50336 477 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 FGF8P55075 233 aaPredicted RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 PLP1P60201 277 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 HERVK_113P61574 105 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 YWHAGP61981 247 aaKnown RBP eCLIP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ACTA2P62736 377 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 RPS21P63220 83 aaKnown RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ACTG2P63267 376 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ACTC1P68032 377 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 MRPS22P82650 360 aaKnown RBP1.57□□□□□ -2.16
PTPRC-208ENST00000427110 PAX5Q02548 391 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ZNF92Q03936 586 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 PPIL2Q13356 520 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 TFDP3Q5H9I0 405 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 CCDC183Q5T5S1 534 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 TSPO2Q5TGU0 170 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 Q6P435 159 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 TMEM107Q6UX40 140 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 TMEM179Q6ZVK1 233 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 H2AFVQ71UI9 128 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 COPS6Q7L5N1 327 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 PEX26Q7Z412 305 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 OAFQ86UD1 273 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 LHFPL3Q86UP9 236 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 FAM228AQ86W67 206 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 EID2Q8N6I1 236 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 CEP112Q8N8E3 955 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 FAM184AQ8NB25 1140 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 SPATA4Q8NEY3 305 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 OR2L3Q8NG85 312 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 RHEBL1Q8TAI7 183 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 ACTRT1Q8TDG2 376 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 CXorf40AQ8TE69 158 aa1.57□□□□□ -2.16
PTPRC-208ENST00000427110 SRSF12Q8WXF0 261 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms