RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RAP1AP62834 184 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 GNB2P62879 340 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ERVK-25P63136 954 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RPL18Q07020 188 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CDK5R2Q13319 367 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MIDNQ504T8 468 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PAGE3Q5JUK9 113 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 VASH1Q7L8A9 365 aaPredicted RBP10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 NLRC3Q7RTR2 1065 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 C1orf87Q8N0U7 546 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ATG16L2Q8NAA4 619 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OR2Z1Q8NG97 314 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 AKR7LQ8NHP1 331 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 DYDC1Q8WWB3 177 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ASB10Q8WXI3 467 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PTP4A1Q93096 173 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 C7orf26Q96N11 449 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 DUX5Q96PT3 197 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TXNIPQ9H3M7 391 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 KLHL21Q9UJP4 597 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SH3GLB1Q9Y371 365 aa10.37□□□□□ -0.75
HLA-DQB3-203ENST00000425319 A0A1W2PPL8 197 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 NPIPB13A6NJU9 1138 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 NPIPB4C9JG80 1138 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TIMM23O14925 209 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ERLIN1O75477 346 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 FSHBP01225 129 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OPN1SWP03999 348 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 COX5BP10606 129 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 THRBP10828 461 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 IRF2P14316 349 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CDAP32320 146 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MPV17P39210 176 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 AQP2P41181 271 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 IDH3AP50213 366 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZNF133P52736 654 aaPredicted RBP10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SCRN3Q0VDG4 424 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 NFYCQ13952 458 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CYLC2Q14093 348 aaPredicted RBP10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ANKDD1AQ495B1 522 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ALG10Q5BKT4 473 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SPATC1Q76KD6 591 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RRM2BQ7LG56 351 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 DHDDSQ86SQ9 333 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 COMTD1Q86VU5 262 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OR4F5Q8NH21 305 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TMEM239Q8WW34 195 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 GEMIN6Q8WXD5 167 aaKnown RBP10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TMIGD2Q96BF3 282 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CCT8L2Q96SF2 557 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SSBP3Q9BWW4 388 aaPredicted RBP10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OR2H1Q9GZK4 316 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MSL2Q9HCI7 577 aa10.36□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LOC100509620A0A075B734 347 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 A0A0G2JK05 382 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZSCAN5BA6NJL1 495 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 M0QZ24 198 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 XKRYO14609 159 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZNF500O60304 480 aaPredicted RBP10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SLC2A10O95528 541 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 GPANK1O95872 356 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 IGHV2-70P01814 119 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 HOXB9P17482 250 aaPredicted RBP10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MSR1P21757 451 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZFP36P26651 326 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LAP3P28838 519 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SRP9P49458 86 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PCBP3P57721 371 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RPL27P61353 136 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 GUCY1A3Q02108 690 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ST3GAL3Q11203 375 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LAPTM4AQ15012 233 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 FUNDC1Q8IVP5 155 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MSRB3Q8IXL7 192 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZNF101Q8IZC7 436 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ZNF283Q8N7M2 679 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 DEFB108BQ8NET1 73 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TSPEARQ8WU66 669 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RAB40AQ8WXH6 277 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 LZICQ8WZA0 190 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CMBLQ96DG6 245 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SEPHS2Q99611 448 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CGREF1Q99674 301 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 ECSITQ9BQ95 431 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PCDHAC1Q9H158 963 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MMP26Q9NRE1 261 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 MRGBPQ9NV56 204 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 DYSFO75923 2080 aa10.35□□□□□ -0.75
HLA-DQB3-203ENST00000425319 A8MXK9 166 aa10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TRAPPC2LH3BP13 241 aa10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OR5F1O95221 314 aa10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RPS2P15880 293 aaKnown RBP10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 WNT5AP41221 380 aa10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 RGS6P49758 472 aa10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 CTXN1P60606 82 aa10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 PSG7Q13046 419 aa10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 TOP3AQ13472 1001 aaPredicted RBP10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 SLC9A3R2Q15599 337 aa10.34□□□□□ -0.75
HLA-DQB3-203ENST00000425319 OCLNQ16625 522 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms