RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 FPR3P25089 353 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 CSNK1A1P48729 337 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 SLC9A3P48764 834 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 SNTB2Q13425 540 aaKnown RBP13.9□□□□□ -0.18
DDR1-234ENST00000424544 FAM166AQ6J272 317 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 KRT80Q6KB66 452 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 CD300LDQ6UXZ3 194 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 NRG4Q8WWG1 115 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 DNAJC9Q8WXX5 260 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 TMEM158Q8WZ71 300 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 SLC25A44Q96H78 314 aaPredicted RBP13.9□□□□□ -0.18
DDR1-234ENST00000424544 NIPSNAP1Q9BPW8 284 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 MRPL13Q9BYD1 178 aaKnown RBP13.9□□□□□ -0.18
DDR1-234ENST00000424544 MRPL37Q9BZE1 423 aaKnown RBP13.9□□□□□ -0.18
DDR1-234ENST00000424544 USE1Q9NZ43 259 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 KIF17Q9P2E2 1029 aa13.9□□□□□ -0.18
DDR1-234ENST00000424544 C11orf98E9PRG8 122 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 CDC42EP2O14613 210 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 EI24O14681 340 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 PHF1O43189 567 aaPredicted RBP13.89□□□□□ -0.19
DDR1-234ENST00000424544 PTP4A3O75365 173 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 UBL3O95164 117 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 OR6A2O95222 327 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 ADRA2AP08913 450 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 PATE4P0C8F1 98 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 PGA4P0DJD7 388 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 PGA3P0DJD8 388 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 ZNF26P17031 533 aaPredicted RBP13.89□□□□□ -0.19
DDR1-234ENST00000424544 PEX2P28328 305 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 ALDH3A2P51648 485 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 ZNF133P52736 654 aaPredicted RBP13.89□□□□□ -0.19
DDR1-234ENST00000424544 ANKDD1AQ495B1 522 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 NRN1LQ496H8 165 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 ZBED5Q49AG3 693 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 FAM120AOSQ5T036 256 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 KDM4DQ6B0I6 523 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 OAFQ86UD1 273 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 SLC22A24Q8N4F4 322 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 PACRGLQ8N7B6 248 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 UBASH3BQ8TF42 649 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 HPS1Q92902 700 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 SHARPINQ9H0F6 387 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 MS4A5Q9H3V2 200 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 TMEM38BQ9NVV0 291 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 FBXL3Q9UKT7 428 aa13.89□□□□□ -0.19
DDR1-234ENST00000424544 LRP5LA4QPB2 252 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 DHHO43323 396 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 SYNGR3O43761 229 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 TGFAP01135 160 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 ALPLP05186 524 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 OR8G3PP0DMU2 310 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 IL2RGP31785 369 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 PTDSS1P48651 473 aaKnown RBP13.88□□□□□ -0.19
DDR1-234ENST00000424544 RUNX1T1Q06455 604 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 RAB39AQ14964 217 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 SNCBQ16143 134 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 RASSF6Q6ZTQ3 369 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 LRP11Q86VZ4 500 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 GALNT4Q8N4A0 578 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 OR51A7Q8NH64 312 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 ZNF566Q969W8 418 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 RACGAP1Q9H0H5 632 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 VCX3BQ9H321 246 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 PAPOLBQ9NRJ5 636 aaKnown RBP13.88□□□□□ -0.19
DDR1-234ENST00000424544 KRT84Q9NSB2 600 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 REV1Q9UBZ9 1251 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 TMEFF2Q9UIK5 374 aaPredicted RBP13.88□□□□□ -0.19
DDR1-234ENST00000424544 KCNS2Q9ULS6 477 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 SPEF1Q9Y4P9 236 aa13.88□□□□□ -0.19
DDR1-234ENST00000424544 CENPBD1B2RD01 187 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 BLOC1S5-TXNDC5H3BN57 136 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 RNF13O43567 381 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 MITFO75030 526 aaPredicted RBP13.87□□□□□ -0.19
DDR1-234ENST00000424544 SERPINI2O75830 405 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 QDPRP09417 244 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 OSMP13725 252 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 RAD23AP54725 363 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 TAF11Q15544 211 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 CARTPTQ16568 116 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 ELFN2Q5R3F8 820 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 NANOGNBQ7Z5D8 188 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 OR13C2Q8NGS9 318 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 MCHR2Q969V1 340 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 NMD3Q96D46 503 aaKnown RBP13.87□□□□□ -0.19
DDR1-234ENST00000424544 VCXQ9H320 206 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 MYEF2Q9P2K5 600 aaKnown RBP13.87□□□□□ -0.19
DDR1-234ENST00000424544 SIGLEC7Q9Y286 467 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 HIF3AQ9Y2N7 669 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 ORC6Q9Y5N6 252 aa13.87□□□□□ -0.19
DDR1-234ENST00000424544 TRAV27A0A087WT01 109 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 LYNX1G3V0Z9 82 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 RAB36O95755 333 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 BCL10O95999 233 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 ERCC1P07992 297 aaPredicted RBP13.86□□□□□ -0.19
DDR1-234ENST00000424544 LYNX1P0DP58 116 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 COL8A2P25067 703 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 AQP2P41181 271 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 CHN2P52757 468 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 FHL1Q13642 323 aa13.86□□□□□ -0.19
DDR1-234ENST00000424544 RFX4Q33E94 735 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms