RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TXNIPQ9H3M7 391 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 GAREM1Q9H706 876 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 TMEM100Q9NV29 134 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 KCNG2Q9UJ96 466 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 RAB22AQ9UL26 194 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 HHLA2Q9UM44 414 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 METTL21EPA6NDL7 271 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 FRG2CA6NGY1 282 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 C4orf47A7E2U8 309 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 OIP5O43482 229 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 DXOO77932 396 aaKnown RBP13.7□□□□□ -0.22
C9orf3-204ENST00000424143 ATG12O94817 140 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 UTS2O95399 124 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 HPGDP15428 266 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 HOXA1P49639 335 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-204ENST00000424143 PGDP52209 483 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 CYCSP99999 105 aaKnown RBP13.7□□□□□ -0.22
C9orf3-204ENST00000424143 MC2RQ01718 297 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 NR0B2Q15466 257 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 TOMM34Q15785 309 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-204ENST00000424143 PCK2Q16822 640 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 ARMC6Q6NXE6 501 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 LSRQ86X29 649 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-204ENST00000424143 FRMD1Q8N878 549 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 PHOSPHO1Q8TCT1 267 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 AMELYQ99218 206 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 VRK1Q99986 396 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-204ENST00000424143 C8orf33Q9H7E9 229 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-204ENST00000424143 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 FAM60AQ9NP50 221 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 MSRAQ9UJ68 235 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 CARHSP1Q9Y2V2 147 aaKnown RBP13.7□□□□□ -0.22
C9orf3-204ENST00000424143 R4GMQ9 66 aa13.7□□□□□ -0.22
C9orf3-204ENST00000424143 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 TMEM218A2RU14 115 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 CPED1A4D0V7 1026 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 H0YIG0 161 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 SULT2B1O00204 365 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 ST6GAL1P15907 406 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 GDI1P31150 447 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 PBX2P40425 430 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 RABIFP47224 123 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 BTG2P78543 158 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 MICBQ29980 383 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 ZNF584Q8IVC4 421 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 SVBPQ8N300 66 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 GALNT16Q8N428 558 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 OR1J2Q8NGS2 313 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 STK35Q8TDR2 534 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 DVL3Q92997 716 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-204ENST00000424143 TCTN2Q96GX1 697 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 TINAGL1Q9GZM7 467 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-204ENST00000424143 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 RHBDD3Q9Y3P4 386 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 MMACHCQ9Y4U1 282 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 MPDZO75970 2070 aa13.69□□□□□ -0.22
C9orf3-204ENST00000424143 ARHGEF17Q96PE2 2063 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-204ENST00000424143 A0A0A6YYC8 382 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 NPIPB13A6NJU9 1138 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 NPIPB4C9JG80 1138 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 I3L1I5 382 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 NPIPB7O75200 414 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 PNPP00491 289 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 CD79AP11912 226 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 HOXB2P14652 356 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 COL9A1P20849 921 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 CRABP1P29762 137 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 CASRP41180 1078 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 TAS2R31P59538 309 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 GPM6BQ13491 265 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 INPP5JQ15735 1006 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 GLYATL3Q5SZD4 288 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 TMEM244Q5VVB8 128 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 PAPD4Q6PIY7 484 aaKnown RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 AVL9Q8NBF6 648 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 RELL2Q8NC24 303 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 SLC30A7Q8NEW0 376 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 OR8S1Q8NH09 359 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 OR8K3Q8NH51 312 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 THAP6Q8TBB0 222 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 SLC37A2Q8TED4 501 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 PMEPA1Q969W9 287 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 CDCA3Q99618 268 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 PHB2Q99623 299 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 SLC6A7Q99884 636 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 NUDT9Q9BW91 350 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 ULBP3Q9BZM4 244 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 WDR13Q9H1Z4 485 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 MRPL22Q9NWU5 206 aaKnown RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 MKL2Q9ULH7 1088 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 DOCK8Q8NF50 2099 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 TEX13DA0A0J9YY54 714 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-204ENST00000424143 C9orf170A2RU37 121 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 DBX1A6NMT0 343 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 H0Y8X5 98 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 TO15178 435 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 HCRTR1O43613 425 aa13.68□□□□□ -0.22
C9orf3-204ENST00000424143 DUS4LO95620 317 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms