RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 MARCH7Q9H992 704 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 DNAJC27Q9NZQ0 273 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 COMMD3-BMI1R4GMX3 469 aa14.82□□□□□ -0.04
COL7A1-202ENST00000422991 TVP23AA6NH52 213 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 C12orf71A8MTZ7 269 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 CLIC3O95833 236 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 COX6B1P14854 86 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 GABRB1P18505 474 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 PAX7P23759 505 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 GSTT1P30711 240 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 IL18R1Q13478 541 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 GSG1Q2KHT4 349 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 SLC25A30Q5SVS4 291 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 ALKBH2Q6NS38 261 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-202ENST00000422991 FAM169BQ8N8A8 192 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF511Q8NB15 262 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 OR10H5Q8NGA6 315 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 RHOXF1Q8NHV9 184 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 TFAP2CQ92754 450 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 ZMYND19Q96E35 227 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF582Q96NG8 517 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-202ENST00000422991 KCNN2Q9H2S1 579 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 MOV10Q9HCE1 1003 aaKnown RBP14.81□□□□□ -0.04
COL7A1-202ENST00000422991 CRNNQ9UBG3 495 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-202ENST00000422991 KCNN3Q9UGI6 736 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 KCNG2Q9UJ96 466 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 LHFPL6Q9Y693 200 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 ITPR2Q14571 2701 aa14.81□□□□□ -0.04
COL7A1-202ENST00000422991 TEX15Q9BXT5 2789 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 MPZL2O60487 215 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 IGKV3-15P01624 115 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 IGLV1-44P01699 117 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 GNAO1P09471 354 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 PSKH1P11801 424 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 CBR1P16152 277 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF32P17041 273 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 HSPA13P48723 471 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF83P51522 516 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 PCBD1P61457 104 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 RPS7P62081 194 aaKnown RBP14.8□□□□□ -0.04
COL7A1-202ENST00000422991 PIGFQ07326 219 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 AQP6Q13520 282 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 SNCBQ16143 134 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 C6orf52Q5T4I8 152 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 LCN1P1Q5VSP4 162 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 TMEM53Q6P2H8 277 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 USP51Q70EK9 711 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 MEPCEQ7L2J0 689 aaKnown RBP14.8□□□□□ -0.04
COL7A1-202ENST00000422991 SYT9Q86SS6 491 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 SETD9Q8NE22 299 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF75AQ96N20 296 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 TEAD3Q99594 435 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 WACQ9BTA9 647 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 C1QTNF6Q9BXI9 259 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 RASSF4Q9H2L5 321 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 WDR76Q9H967 626 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 CCNB1IP1Q9NPC3 277 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 NGBQ9NPG2 151 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 RASSF1Q9NS23 344 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 ASH2LQ9UBL3 628 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 POLR1DQ9Y2S0 133 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 NOTCH2Q04721 2471 aa14.8□□□□□ -0.04
COL7A1-202ENST00000422991 SLC22A31A6NKX4 558 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 DEFB108AA8MXU0 73 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 SIAH2O43255 324 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 RAB36O95755 333 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF823P16415 610 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 ARR3P36575 388 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 ENTPD1P49961 510 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 CDH11P55287 796 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 RAB1AP62820 205 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 ADAM8P78325 824 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 GGTLC2Q14390 218 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 MAD2L1BPQ15013 274 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-202ENST00000422991 OCLNQ16625 522 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 PCK2Q16822 640 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 C3orf36Q3SXR2 165 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 B3GLCTQ6Y288 498 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 MYPOPQ86VE0 399 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-202ENST00000422991 TIGD4Q8IY51 512 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 INTS14Q96SY0 518 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 OR2H1Q9GZK4 316 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 RNF121Q9H920 327 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 H2AFY2Q9P0M6 372 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-202ENST00000422991 AASSQ9UDR5 926 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 CYB5R1Q9UHQ9 305 aa14.79□□□□□ -0.04
COL7A1-202ENST00000422991 IGHV1-18A0A0C4DH31 117 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 M0R1B8 84 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 CASKO14936 926 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 SELENOFO60613 162 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 ENTPD6O75354 484 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 CELA3BP08861 270 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 ZNF14P17017 642 aaPredicted RBP14.78□□□□□ -0.04
COL7A1-202ENST00000422991 HTR1FP30939 366 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 IDH3GP51553 393 aaPredicted RBP14.78□□□□□ -0.04
COL7A1-202ENST00000422991 HIST1H3AP68431 136 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 PSG4Q00888 419 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 IL5RAQ01344 420 aa14.78□□□□□ -0.04
COL7A1-202ENST00000422991 SCRN3Q0VDG4 424 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms