RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GPA33Q99795 319 aa18.82■□□□□ 0.6
TRAF4-204ENST00000422344 ZNF416Q9BWM5 594 aa18.82■□□□□ 0.6
TRAF4-204ENST00000422344 SYT4Q9H2B2 425 aa18.82■□□□□ 0.6
TRAF4-204ENST00000422344 PRPF19Q9UMS4 504 aaKnown RBP18.82■□□□□ 0.6
TRAF4-204ENST00000422344 A0A096LNT2 108 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 C5orf49A4QMS7 147 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 SLC16A7O60669 478 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 KHDRBS3O75525 346 aaKnown RBP18.81■□□□□ 0.6
TRAF4-204ENST00000422344 IFNA2P01563 188 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 KLF3P57682 345 aaPredicted RBP18.81■□□□□ 0.6
TRAF4-204ENST00000422344 TRIM25Q14258 630 aaKnown RBP18.81■□□□□ 0.6
TRAF4-204ENST00000422344 MAD2L1BPQ15013 274 aaPredicted RBP18.81■□□□□ 0.6
TRAF4-204ENST00000422344 NKPD1Q17RQ9 610 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 TMEM249Q2WGJ8 235 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 SYNPRQ8TBG9 265 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 GNPDA2Q8TDQ7 276 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 POP5Q969H6 163 aaKnown RBP18.81■□□□□ 0.6
TRAF4-204ENST00000422344 FOXN4Q96NZ1 517 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 WACQ9BTA9 647 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 EMC7Q9NPA0 242 aa18.81■□□□□ 0.6
TRAF4-204ENST00000422344 TLX2O43763 284 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-204ENST00000422344 PPP1R3DO95685 299 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 APEHP13798 732 aaKnown RBP18.8■□□□□ 0.6
TRAF4-204ENST00000422344 CTLA4P16410 223 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 NR4A2P43354 598 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 FXYD6P3P58550 94 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 ENDOGQ14249 297 aaKnown RBP18.8■□□□□ 0.6
TRAF4-204ENST00000422344 RFX4Q33E94 735 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 LCN8Q6JVE9 175 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 DNM1P34Q6PK57 102 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 SYT9Q86SS6 491 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 JAZF1Q86VZ6 243 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 HIPK1Q86Z02 1210 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 OR1J1Q8NGS3 322 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 UBASH3BQ8TF42 649 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 SNX33Q8WV41 574 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 POM121L2Q96KW2 1035 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 LRGUKQ96M69 825 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 ERMAPQ96PL5 475 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-204ENST00000422344 IFT27Q9BW83 186 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 WNT5BQ9H1J7 359 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 OR52D1Q9H346 318 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 MAGIXQ9H6Y5 334 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 SLCO1C1Q9NYB5 712 aa18.8■□□□□ 0.6
TRAF4-204ENST00000422344 VSX1Q9NZR4 365 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-204ENST00000422344 MYEF2Q9P2K5 600 aaKnown RBP18.8■□□□□ 0.6
TRAF4-204ENST00000422344 VWC2LB2RUY7 222 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 TNFRSF11BO00300 401 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 TXNDC12O95881 172 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 T-ENOLP0DO92 83 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 ERVS71-1P61550 626 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 SCRN3Q0VDG4 424 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 FAM98BQ52LJ0 330 aaKnown RBP18.79■□□□□ 0.6
TRAF4-204ENST00000422344 ZNF774Q6NX45 483 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 UGT2A3Q6UWM9 527 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 GLB1L2Q8IW92 636 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 LINC00471Q8N535 108 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 BCAS4Q8TDM0 211 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 CCDC124Q96CT7 223 aaKnown RBP18.79■□□□□ 0.6
TRAF4-204ENST00000422344 TAAR3PQ9P1P4 343 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 NDRG4Q9ULP0 352 aaKnown RBP18.79■□□□□ 0.6
TRAF4-204ENST00000422344 NBEAL1Q6ZS30 2694 aa18.79■□□□□ 0.6
TRAF4-204ENST00000422344 LOC100509620A0A075B734 347 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 IMPA2O14732 288 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 IGFBP1P08833 259 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-204ENST00000422344 ZNF250P15622 560 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 NOS3P29474 1203 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 CRABP1P29762 137 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 CENPAP49450 140 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 TSPAN31Q12999 210 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 MOGQ16653 247 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 ALKBH6Q3KRA9 238 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 C1orf94Q6P1W5 598 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 ARL9Q6T311 187 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 ZNF786Q8N393 782 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 SAMD8Q96LT4 415 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 NUAK2Q9H093 628 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 C1orf21Q9H246 121 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 FAM53CQ9NYF3 392 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 COA3Q9Y2R0 106 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-204ENST00000422344 LYVE1Q9Y5Y7 322 aa18.78■□□□□ 0.6
TRAF4-204ENST00000422344 TCRBV5S2A0A599 114 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 CLPTM1O96005 669 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 RENP00797 406 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 MT-ND5P03915 603 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 SCG5P05408 212 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 NAT2P11245 290 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 GCH1P30793 250 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 GSSP48637 474 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 CYB5R2Q6BCY4 276 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 PGBD2Q6P3X8 592 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 TMEM154Q6P9G4 183 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 PTCHD4Q6ZW05 846 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 TRPM8Q7Z2W7 1104 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 C1orf174Q8IYL3 243 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 ABHD4Q8TB40 342 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 ASB9Q96DX5 294 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 THTPAQ9BU02 230 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 TRIM15Q9C019 465 aa18.77■□□□□ 0.6
TRAF4-204ENST00000422344 BPESC1Q9GZL8 116 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms