RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 C20orf141Q9NUB4 165 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 ZNF69Q9UC07 566 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 OR52A1Q9UKL2 312 aa8.78□□□□□ -1
CMSS1-201ENST00000421999 MYLKQ15746 1914 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 ATRXP46100 2492 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 PRSS37A4D1T9 235 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 FITM1A5D6W6 292 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 MASP2O00187 686 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 NTN1O95631 604 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 SPI1P17947 270 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 PRKACBP22694 351 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 ACP1P24666 158 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 RIPPLY1Q0D2K3 151 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 SWI5Q1ZZU3 235 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 XKRXQ6PP77 449 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 FGGYQ96C11 551 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 C14orf119Q9NWQ9 140 aa8.77□□□□□ -1
CMSS1-201ENST00000421999 A0A1W2PQL4 384 aaPredicted RBP8.77□□□□□ -1.01
CMSS1-201ENST00000421999 SFTPCP11686 197 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 CLDN12P56749 244 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 GRB2P62993 217 aaKnown RBP8.77□□□□□ -1.01
CMSS1-201ENST00000421999 HEPHL1Q6MZM0 1159 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 OR5H2Q8NGV7 314 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 AKR7LQ8NHP1 331 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 HPS1Q92902 700 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 SLAMF6Q96DU3 332 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 TXNDC15Q96J42 360 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 FOXB1Q99853 325 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 PDCD1LG2Q9BQ51 273 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 TMEFF2Q9UIK5 374 aaPredicted RBP8.77□□□□□ -1.01
CMSS1-201ENST00000421999 SESN1Q9Y6P5 492 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 PCNX2A6NKB5 2137 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 A0A0B4J2E0 115 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 A0A1B0GX12 115 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 TRIM64A6NGJ6 449 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 LRRC30A6NM36 301 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 B4DXG7 233 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 RAD52P43351 418 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 HCCSP53701 268 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF141Q15928 474 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 CTU2Q2VPK5 515 aaKnown RBP8.77□□□□□ -1.01
CMSS1-201ENST00000421999 SLC16A9Q7RTY1 509 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 ELMOD2Q8IZ81 293 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 ACOT12Q8WYK0 555 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 GABARAPL1Q9H0R8 117 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 SLCO5A1Q9H2Y9 848 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 ENPP5Q9UJA9 477 aa8.77□□□□□ -1.01
CMSS1-201ENST00000421999 UBE2J1Q9Y385 318 aaPredicted RBP8.77□□□□□ -1.01
CMSS1-201ENST00000421999 NUP210Q8TEM1 1887 aaPredicted RBP8.77□□□□□ -1.01
CMSS1-201ENST00000421999 LRP3O75074 770 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 AMY2AP04746 511 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 TFAP2AP05549 437 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 GALNSP34059 522 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 CX3CR1P49238 355 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 GDPGP1Q6ZNW5 385 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 TIMD4Q96H15 378 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 PLA2G12AQ9BZM1 189 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 METTL9Q9H1A3 318 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 KCNN3Q9UGI6 736 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 PSORS1C1Q9UIG5 152 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 HS3ST3B1Q9Y662 390 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 MEIS3P1A6NDR6 274 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ZAR1LA6NP61 321 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 FFAR1O14842 300 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 MPPED1O15442 326 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 LYZL6O75951 148 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 SLC34A2O95436 690 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 GABRA1P14867 456 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 PVALBP20472 110 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ARR3P36575 388 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 CD96P40200 585 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 LSM11P83369 360 aaKnown RBP eCLIP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 TOMM34Q15785 309 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 TBCEQ15813 527 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 SLC35D3Q5M8T2 416 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 USP51Q70EK9 711 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 KIF18BQ86Y91 864 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF615Q8N8J6 731 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 RAB9BQ9NP90 201 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 MMP25Q9NPA2 562 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 FLRT3Q9NZU0 649 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 GNG12Q9UBI6 72 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 GBF1Q92538 1859 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 IGKV1D-16P01601 117 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 SFTPBP07988 381 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 TMIGD3P0DMS9 266 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 CDAP32320 146 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF83P51522 516 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 RAB1AP62820 205 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 INSM1Q01101 510 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 CDC20Q12834 499 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 MLLT11Q13015 90 aaPredicted RBP8.76□□□□□ -1.01
CMSS1-201ENST00000421999 EDDM3AQ14507 147 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 POU4F3Q15319 338 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ZNF74Q16587 644 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 AKIRIN2Q53H80 203 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 ZMAT1Q5H9K5 638 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 TMEM211Q6ICI0 200 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 AKAP14Q86UN6 197 aa8.76□□□□□ -1.01
CMSS1-201ENST00000421999 CD163Q86VB7 1156 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms