RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SIGLEC7Q9Y286 467 aa9.41□□□□□ -0.9
SSBP3-206ENST00000420121 ARHGAP32A7KAX9 2087 aa9.41□□□□□ -0.9
SSBP3-206ENST00000420121 DYSFO75923 2080 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 TRBV4-1A0A0J9YWV2 114 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 A0A1W2PRQ8 180 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 C5orf49A4QMS7 147 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 GMNCA6NCL1 334 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 A6NIZ1 184 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 GSTA4O15217 222 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 ATP8B1O43520 1251 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 NGFP01138 241 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 SEMG1P04279 462 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 CTLA4P16410 223 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 CCNOP22674 350 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 PRDX6P30041 224 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 GPR6P46095 362 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-206ENST00000420121 OMPP47874 163 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 TMEM33P57088 247 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 RAP1BP61224 184 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 RAP1AP62834 184 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 CCL8P80075 99 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 SRSF2Q01130 221 aaKnown RBP9.4□□□□□ -0.9
SSBP3-206ENST00000420121 GLO1Q04760 184 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 DGCR6Q14129 220 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 SPRNQ5BIV9 151 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 SPATA46Q5T0L3 261 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 GLYATQ6IB77 296 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 ZNF774Q6NX45 483 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 RNF148Q8N7C7 305 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 SLC25A40Q8TBP6 338 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 FAM162AQ96A26 154 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 GPX7Q96SL4 187 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-206ENST00000420121 GPA33Q99795 319 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 LRMDAQ9H2I8 198 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 NARFLQ9H6Q4 476 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 EMC7Q9NPA0 242 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 SLCO1C1Q9NYB5 712 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 KLHL21Q9UJP4 597 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 CACNG2Q9Y698 323 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 WNK2Q9Y3S1 2297 aa9.4□□□□□ -0.9
SSBP3-206ENST00000420121 A0A1W2PPL8 197 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 PRSS37A4D1T9 235 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 ZSCAN5BA6NJL1 495 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 NDUFAB1O14561 156 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 CDC14BO60729 498 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 DIRAS1O95057 198 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 IGHV1-46P01743 117 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 H1F0P07305 194 aaKnown RBP9.39□□□□□ -0.91
SSBP3-206ENST00000420121 RHCEP18577 417 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 MSR1P21757 451 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 CRYBB2P43320 205 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 GDI2P50395 445 aaKnown RBP9.39□□□□□ -0.91
SSBP3-206ENST00000420121 DVL1P1P54792 670 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-206ENST00000420121 HNRNPA0Q13151 305 aaKnown RBP9.39□□□□□ -0.91
SSBP3-206ENST00000420121 MBNL2Q5VZF2 373 aaKnown RBP9.39□□□□□ -0.91
SSBP3-206ENST00000420121 OTPQ5XKR4 325 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 PTCHD4Q6ZW05 846 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 SYT9Q86SS6 491 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 ICA1LQ8NDH6 482 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 KLF14Q8TD94 323 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-206ENST00000420121 TMEM158Q8WZ71 300 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 RASD2Q96D21 266 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 CMTM5Q96DZ9 223 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 OR2J1Q9GZK6 312 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 KCNN2Q9H2S1 579 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 POFUT1Q9H488 388 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 GORASP2Q9H8Y8 452 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 SPAG4Q9NPE6 437 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 NRIP3Q9NQ35 241 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 TREM2Q9NZC2 230 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 CD300AQ9UGN4 299 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 TMEFF2Q9UIK5 374 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-206ENST00000420121 RPS6KA6Q9UK32 745 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 TIMM10BQ9Y5J6 103 aa9.39□□□□□ -0.91
SSBP3-206ENST00000420121 TENM1Q9UKZ4 2725 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 TEX13CA0A0J9YWL9 993 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 B4DSR2 109 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 PPIHO43447 177 aaKnown RBP9.38□□□□□ -0.91
SSBP3-206ENST00000420121 AHCYL1O43865 530 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 DEAF1O75398 565 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-206ENST00000420121 TFP02787 698 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 ADH4P08319 380 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 GAAP10253 952 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 HSD17B1P14061 328 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 RPL4P36578 427 aaKnown RBP9.38□□□□□ -0.91
SSBP3-206ENST00000420121 SELENOVP59797 346 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 PPP1CBP62140 327 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 KRR1Q13601 381 aaKnown RBP9.38□□□□□ -0.91
SSBP3-206ENST00000420121 PCGF3Q3KNV8 242 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 ZNF718Q3SXZ3 478 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 TMEM154Q6P9G4 183 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 USP51Q70EK9 711 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 CYP4Z1Q86W10 505 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 ABHD4Q8TB40 342 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 SNX33Q8WV41 574 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 RSRC1Q96IZ7 334 aaKnown RBP9.38□□□□□ -0.91
SSBP3-206ENST00000420121 C4orf45Q96LM5 186 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 ZNF570Q96NI8 536 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 SYT4Q9H2B2 425 aa9.38□□□□□ -0.91
SSBP3-206ENST00000420121 VSX1Q9NZR4 365 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms