RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 OR10D3Q8NH80 312 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 CHPT1Q8WUD6 406 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 MCHR2Q969V1 340 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 APH1AQ96BI3 265 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 TAS2R8Q9NYW2 309 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 HNRNPCP07910 306 aaKnown RBP eCLIP7.49□□□□□ -1.21
USP54-203ENST00000418501 RAB3AP20336 220 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 SOX2P48431 317 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 CDC20Q12834 499 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 CCDC92Q53HC0 331 aaPredicted RBP7.49□□□□□ -1.21
USP54-203ENST00000418501 C10orf128Q5T292 105 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 SLC25A47Q6Q0C1 308 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 PLET1Q6UQ28 207 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.49□□□□□ -1.21
USP54-203ENST00000418501 GALNTL5Q7Z4T8 443 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 KDM8Q8N371 416 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 OR52H1Q8NGJ2 320 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 RFT1Q96AA3 541 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 TMEM45BQ96B21 275 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 PHOX2BQ99453 314 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 RGCCQ9H4X1 137 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 PARD6AQ9NPB6 346 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 NOX4Q9NPH5 578 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 SLCO1C1Q9NYB5 712 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 COPZ2Q9P299 210 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 MRM2Q9UI43 246 aaKnown RBP7.49□□□□□ -1.21
USP54-203ENST00000418501 ITGB1BP2Q9UKP3 347 aa7.49□□□□□ -1.21
USP54-203ENST00000418501 MKRN2OSH3BPM6 223 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 ZIC3O60481 467 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 PGA4P0DJD7 388 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 PGA3P0DJD8 388 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SHC1P29353 583 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 MALLQ13021 153 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 NRN1LQ496H8 165 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 UBE2J2Q8N2K1 259 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 RNF133Q8WVZ7 376 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 C10orf35Q96D05 121 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SORCS2Q96PQ0 1159 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 EMC6Q9BV81 110 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 TTTY12Q9BZ98 90 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 RNF122Q9H9V4 155 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SLC17A5Q9NRA2 495 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 PLEK2Q9NYT0 353 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 GDF2Q9UK05 429 aaPredicted RBP7.48□□□□□ -1.21
USP54-203ENST00000418501 SPATA2Q9UM82 520 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 CEP350Q5VT06 3117 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 ARID1BQ8NFD5 2236 aaPredicted RBP7.48□□□□□ -1.21
USP54-203ENST00000418501 ASXL3Q9C0F0 2248 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 NAP1L6A6NFF2 107 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 CDRT15L2A8MXV6 281 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 ZNF814B7Z6K7 855 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 AIPO00170 330 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 TRAF3IP2O43734 574 aaPredicted RBP7.48□□□□□ -1.21
USP54-203ENST00000418501 OPN1LWP04000 364 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 UBBP0CG47 229 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 ARR3P36575 388 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 MMP16P51512 607 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 UCNP55089 124 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 PSMA6P60900 246 aaKnown RBP7.48□□□□□ -1.21
USP54-203ENST00000418501 MRPS34P82930 218 aaKnown RBP7.48□□□□□ -1.21
USP54-203ENST00000418501 SRYQ05066 204 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 RTP5Q14D33 572 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SPINK14Q6IE38 97 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 RAB12Q6IQ22 244 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 CNIH2Q6PI25 160 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SPATC1Q76KD6 591 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SERPINA12Q8IW75 414 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 CENPSQ8N2Z9 138 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 ZNF485Q8NCK3 441 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 DEDD2Q8WXF8 326 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 AKAP1Q92667 903 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP54-203ENST00000418501 TMEM106AQ96A25 262 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 GPER1Q99527 375 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 KCNJ15Q99712 375 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 POLE4Q9NR33 117 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 CAMK2AQ9UQM7 478 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SPTBP11277 2137 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 PMS2P1A4D2B8 440 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 TTLL8A6PVC2 850 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 FAM166BA8MTA8 275 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SHISA8B8ZZ34 492 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 GDF9O60383 454 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 UBL3O95164 117 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 CST2P09228 141 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 RAB35Q15286 201 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SLC16A14Q7RTX9 510 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 OR6M1Q8NGM8 313 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 OR1J2Q8NGS2 313 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 ADAMTS17Q8TE56 1095 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 TMEM54Q969K7 222 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 OR14A2Q96R54 314 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 DCLRE1CQ96SD1 692 aaKnown RBP7.48□□□□□ -1.21
USP54-203ENST00000418501 OPA3Q9H6K4 179 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 COPS3Q9UNS2 423 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 SCN2AQ99250 2005 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 CENPFP49454 3210 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 A0A0A6YYH2 397 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 A0A0J9YW62 118 aa7.48□□□□□ -1.21
USP54-203ENST00000418501 A6NJ64 397 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms