RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NME2P22392 152 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 THBS2P35442 1172 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 PSMD7P51665 324 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 CLDN20P56880 219 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 MFAP5Q13361 173 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 TGIF1Q15583 401 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 ZNF79Q15937 498 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 WDR38Q5JTN6 314 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 SLC25A25Q6KCM7 469 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 MDS2Q8NDY4 140 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 SETD6Q8TBK2 473 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 HAS2Q92819 552 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 OR2M2Q96R28 347 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 UCN2Q96RP3 112 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 SRXN1Q9BYN0 137 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 NIPAL2Q9H841 368 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 FAIMQ9NVQ4 179 aa14.92□□□□□ -0.02
SSBP3-205ENST00000417664 A0A1W2PPL8 197 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 PROB1E7EW31 1015 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 SMAD9O15198 467 aaKnown RBP14.91□□□□□ -0.02
SSBP3-205ENST00000417664 PIN1P1O15428 100 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 HPGDSO60760 199 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 F10P00742 488 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 KLK2P20151 261 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 KIR3DL2P43630 455 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 MMP16P51512 607 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 NOVA1P51513 510 aaKnown RBP14.91□□□□□ -0.02
SSBP3-205ENST00000417664 LSM6P62312 80 aaKnown RBP14.91□□□□□ -0.02
SSBP3-205ENST00000417664 CEP78Q5JTW2 689 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 OR7E24Q6IFN5 339 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 LRFN4Q6PJG9 635 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 CATSPERDQ86XM0 798 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.91□□□□□ -0.02
SSBP3-205ENST00000417664 SNX29P2Q8IUI4 249 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 TMEM123Q8N131 208 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 OR6N1Q8NGY5 312 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 OR2AJ1Q8NGZ0 328 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 CMTM3Q96MX0 182 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 TCF7L1Q9HCS4 588 aa14.91□□□□□ -0.02
SSBP3-205ENST00000417664 TRBV5-7A0A0A0MS05 114 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 A0A1W2PPK0 400 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 ARGFXA6NJG6 315 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 ACOD1A6NK06 481 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 SRSF10O75494 262 aaKnown RBP14.9□□□□□ -0.02
SSBP3-205ENST00000417664 PTTG1O95997 202 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 H2BFMP0C1H6 154 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 OR10A3P58181 314 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 CARD17Q5XLA6 110 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 CNIH2Q6PI25 160 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 ZNF704Q6ZNC4 412 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-205ENST00000417664 FOXL2NBQ6ZUU3 175 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 OR10D3Q8NH80 312 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 TTTY12Q9BZ98 90 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 SEC61A2Q9H9S3 476 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 CYSLTR2Q9NS75 346 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 PAQR5Q9NXK6 330 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-205ENST00000417664 PLA2G3Q9NZ20 509 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 CNTRLQ7Z7A1 2325 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 GLSO94925 669 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-205ENST00000417664 ISG15P05161 165 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 TALDO1P37837 337 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 RTP5Q14D33 572 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 ABLIM2Q6H8Q1 611 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 LINC00346Q8IVM7 164 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 OR8H2Q8N162 312 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 ZIC4Q8N9L1 334 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 POC5Q8NA72 575 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 IL17RDQ8NFM7 739 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 SLAMF6Q96DU3 332 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 ZNF385AQ96PM9 386 aaKnown RBP14.9□□□□□ -0.02
SSBP3-205ENST00000417664 POLE4Q9NR33 117 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 FOXD3Q9UJU5 478 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-205ENST00000417664 POLR1DQ9Y2S0 133 aa14.9□□□□□ -0.02
SSBP3-205ENST00000417664 MED12Q93074 2177 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 PTPRBP23467 1997 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 KIAA1549Q9HCM3 1950 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 IGHV3-15A0A0B4J1V0 119 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 A0A1B0GTH9 108 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 AIPO00170 330 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 CXCL13O43927 109 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 PNPP00491 289 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 NPR2P20594 1047 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 CDC20Q12834 499 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 BCL2A1Q16548 175 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 OTPQ5XKR4 325 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 KLHL24Q6TFL4 600 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 STAC2Q6ZMT1 411 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 ZFP62Q8NB50 900 aaPredicted RBP14.89□□□□□ -0.03
SSBP3-205ENST00000417664 TRMT10AQ8TBZ6 339 aaKnown RBP14.89□□□□□ -0.03
SSBP3-205ENST00000417664 TMEM106AQ96A25 262 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 COL25A1Q9BXS0 654 aaPredicted RBP14.89□□□□□ -0.03
SSBP3-205ENST00000417664 PPP1R3EQ9H7J1 279 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 RABL2AQ9UBK7 228 aaPredicted RBP14.89□□□□□ -0.03
SSBP3-205ENST00000417664 GDF2Q9UK05 429 aaPredicted RBP14.89□□□□□ -0.03
SSBP3-205ENST00000417664 RABL2BQ9UNT1 228 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 LHFPL6Q9Y693 200 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 V9GY05 133 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 CACNA1CQ13936 2221 aa14.89□□□□□ -0.03
SSBP3-205ENST00000417664 NCKAP5O14513 1909 aa14.88□□□□□ -0.03
SSBP3-205ENST00000417664 TMEM269A0A1B0GVZ9 245 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms