RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 SLC25A19Q9HC21 320 aa10.81□□□□□ -0.68
SKA1-203ENST00000417656 POLR1DQ9Y2S0 133 aa10.81□□□□□ -0.68
SKA1-203ENST00000417656 NAV2Q8IVL1 2488 aa10.81□□□□□ -0.68
SKA1-203ENST00000417656 MAST4O15021 2626 aa10.81□□□□□ -0.68
SKA1-203ENST00000417656 DSCAMO60469 2012 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 PLCE1Q9P212 2302 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 IQCMA0A1B0GVH7 501 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 FAM183AA6NL82 134 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 C12orf71A8MTZ7 269 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 DANCRP0C864 163 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 CLUP10909 449 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 CCL2P13500 99 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 APEX1P27695 318 aaKnown RBP10.8□□□□□ -0.68
SKA1-203ENST00000417656 CRISP1P54107 249 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 PPP2R2BQ00005 443 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 CDK5Q00535 292 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 PSG4Q00888 419 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 HGFACQ04756 655 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 GLO1Q04760 184 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 PLP2Q04941 152 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 SNTB2Q13425 540 aaKnown RBP10.8□□□□□ -0.68
SKA1-203ENST00000417656 AQP6Q13520 282 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 KDM4DQ6B0I6 523 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 KRT80Q6KB66 452 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 ZNF774Q6NX45 483 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 VHLLQ6RSH7 139 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 LYPD4Q6UWN0 246 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 C10orf67Q8IYJ2 551 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 PAQR4Q8N4S7 273 aaPredicted RBP10.8□□□□□ -0.68
SKA1-203ENST00000417656 CPEB3Q8NE35 698 aaKnown RBP10.8□□□□□ -0.68
SKA1-203ENST00000417656 OR51L1Q8NGJ5 315 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 SMAP2Q8WU79 429 aaPredicted RBP10.8□□□□□ -0.68
SKA1-203ENST00000417656 ZNRF4Q8WWF5 429 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 STMN2Q93045 179 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 DHRS9Q9BPW9 319 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 HCAR1Q9BXC0 346 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 NMNAT2Q9BZQ4 307 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 WNT5BQ9H1J7 359 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 MED20Q9H944 212 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 ASH2LQ9UBL3 628 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 TMEFF2Q9UIK5 374 aaPredicted RBP10.8□□□□□ -0.68
SKA1-203ENST00000417656 ITGB1BP2Q9UKP3 347 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 EDARQ9UNE0 448 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 LAMP3Q9UQV4 416 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 TEX15Q9BXT5 2789 aa10.8□□□□□ -0.68
SKA1-203ENST00000417656 TVP23AA6NH52 213 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 M0R129 80 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 EI24O14681 340 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 SURF4O15260 269 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 DOK2O60496 412 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 HLA-DQA2P01906 255 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 TFP02787 698 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 ZNF35P13682 527 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 SPI1P17947 270 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 EPHA2P29317 976 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 FABP6P51161 128 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 SLC25A1P53007 311 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 PCBD1P61457 104 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
SKA1-203ENST00000417656 ESRRGP62508 458 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 SCRN3Q0VDG4 424 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 KCNMB1Q16558 191 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 TBC1D28Q2M2D7 210 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 DEFB113Q30KQ7 82 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 LINC00346Q8IVM7 164 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 PQLC1Q8N2U9 271 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 NUP37Q8NFH4 326 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 IL17RDQ8NFM7 739 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 OR10H5Q8NGA6 315 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 OR4F15Q8NGB8 312 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 TMEM171Q8WVE6 324 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 IGFBPL1Q8WX77 278 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 OTULINQ96BN8 352 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 OSBPL10Q9BXB5 764 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 OR51B6Q9H340 312 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 C1orf198Q9H425 327 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 RIBC2Q9H4K1 309 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 CDH20Q9HBT6 801 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 CA10Q9NS85 328 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 FAIMQ9NVQ4 179 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 MRPL22Q9NWU5 206 aaKnown RBP10.79□□□□□ -0.68
SKA1-203ENST00000417656 TIMM10BQ9Y5J6 103 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 LHFPL6Q9Y693 200 aa10.79□□□□□ -0.68
SKA1-203ENST00000417656 CSMD1Q96PZ7 3565 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 SGCEO43556 437 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 GPRIN2O60269 458 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 BAG2O95816 211 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 HMGN1P05114 100 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 PSKH1P11801 424 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 PAICSP22234 425 aaKnown RBP10.78□□□□□ -0.68
SKA1-203ENST00000417656 CCNOP22674 350 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 STOMP27105 288 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 TTKP33981 857 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 APLNRP35414 380 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 THBS4P35443 961 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 ART1P52961 327 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 NKX6-1P78426 367 aaPredicted RBP10.78□□□□□ -0.68
SKA1-203ENST00000417656 GALK2Q01415 458 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 TEKQ02763 1124 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 DAG1Q14118 895 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms