RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RBM4BQ9BQ04 359 aaKnown RBP20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 RBM4Q9BWF3 364 aaKnown RBP20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 FN3KQ9H479 309 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 POLR1DQ9Y2S0 133 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 SAC3D1A6NKF1 404 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 ZNF35P13682 527 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 APOBEC3AP31941 199 aaPredicted RBP20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 SLC25A1P53007 311 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 PSG4Q00888 419 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 AQP6Q13520 282 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 AGAP6Q5VW22 663 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 ACSM5Q6NUN0 579 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 UGT2A3Q6UWM9 527 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 ZNF584Q8IVC4 421 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 NUP37Q8NFH4 326 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 PLEKHA8Q96JA3 519 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 CDADC1Q9BWV3 514 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 OR2H1Q9GZK4 316 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 CXorf56Q9H5V9 222 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 CDH20Q9HBT6 801 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 SLC25A19Q9HC21 320 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 BEX4Q9NWD9 120 aaPredicted RBP20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 LAMP3Q9UQV4 416 aa20.01■□□□□ 0.79
SMARCB1-205ENST00000417137 MPZL1O95297 269 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 DANCRP0C864 163 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 IGFBP5P24593 272 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 TTKP33981 857 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 BLVRAP53004 296 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 TEKQ02763 1124 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 DAG1Q14118 895 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 DEFB113Q30KQ7 82 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 B3GLCTQ6Y288 498 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 PRRG3Q9BZD7 231 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 CA10Q9NS85 328 aa20■□□□□ 0.79
SMARCB1-205ENST00000417137 ANKRD17O75179 2603 aaKnown RBP20■□□□□ 0.79
SMARCB1-205ENST00000417137 CSMD1Q96PZ7 3565 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 FAM171A2A8MVW0 826 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 GAAP10253 952 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 ZNF823P16415 610 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 NR4A1P22736 598 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 STOMP27105 288 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 HGFACQ04756 655 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 PTGES3Q15185 160 aaKnown RBP19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 MUC15Q8N387 334 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 CPEB3Q8NE35 698 aaKnown RBP19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 SLC26A10Q8NG04 563 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 AKR7LQ8NHP1 331 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 OTULINQ96BN8 352 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 NMNAT2Q9BZQ4 307 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 GRIP2Q9C0E4 1043 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 WNT5BQ9H1J7 359 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 ASH2LQ9UBL3 628 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 KCNG2Q9UJ96 466 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 ITGB1BP2Q9UKP3 347 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 ORC6Q9Y5N6 252 aa19.99■□□□□ 0.79
SMARCB1-205ENST00000417137 PRR23D1E9PI22 279 aaPredicted RBP19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 SURF4O15260 269 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 SGCEO43556 437 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 SMPD2O60906 423 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 MITFO75030 526 aaPredicted RBP19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 SNAP29O95721 258 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 BAG2O95816 211 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 PRR23D2P0DMB1 279 aaPredicted RBP19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 BMP4P12644 408 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 APEX1P27695 318 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 FMO3P31513 532 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 PYCR1P32322 319 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 GDI2P50395 445 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 TMEM236Q5W0B7 351 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 UNQ6126/PRO20091Q6UXV3 157 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 PQLC1Q8N2U9 271 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 GJC3Q8NFK1 279 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 OR9Q1Q8NGQ5 310 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 OR2AJ1Q8NGZ0 328 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 ZNF442Q9H7R0 627 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 CBLN4Q9NTU7 201 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 EIF3KQ9UBQ5 218 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 NDRG4Q9ULP0 352 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 CADP27708 2225 aa19.98■□□□□ 0.79
SMARCB1-205ENST00000417137 GPANK1O95872 356 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 TFP02787 698 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 SOD3P08294 240 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 COX5BP10606 129 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 SPI1P17947 270 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 RIPPLY3P57055 190 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 RPS23P62266 143 aaKnown RBP19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 PPP2R2BQ00005 443 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 SNTB2Q13425 540 aaKnown RBP19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 SNAPC1Q16533 368 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 KRT80Q6KB66 452 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 ZNF774Q6NX45 483 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 VHLLQ6RSH7 139 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 DTX2Q86UW9 622 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 CIB1Q99828 191 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 FOXC2Q99958 501 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 C9orf16Q9BUW7 83 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 PLEK2Q9NYT0 353 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 TVP23BQ9NYZ1 205 aa19.97■□□□□ 0.79
SMARCB1-205ENST00000417137 TMEFF2Q9UIK5 374 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms