RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 PRKACGP22612 351 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 ARR3P36575 388 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 MAGEB1P43366 347 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 GPR6P46095 362 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 GSSP48637 474 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 SLC9A3P48764 834 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 SH3BGRP55822 239 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 ERVS71-1P61550 626 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 LMO4P61968 165 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 COX10Q12887 443 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 TSPAN31Q12999 210 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 C1DQ13901 141 aaKnown RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 LAPTM4AQ15012 233 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 CD300LDQ6UXZ3 194 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 H1FNTQ75WM6 255 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 HIST3H2AQ7L7L0 130 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 HS3ST5Q8IZT8 346 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 PAQR4Q8N4S7 273 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 C10orf53Q8N6V4 93 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 SCAIQ8N9R8 606 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 OR9Q2Q8NGE9 314 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 HIST1H2ACQ93077 130 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 FAM46AQ96IP4 442 aaKnown RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 OXGR1Q96P68 337 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 MOGAT1Q96PD6 335 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 FEVQ99581 238 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 ASPNQ9BXN1 380 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 GABARAPL1Q9H0R8 117 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 ESM1Q9NQ30 184 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 NKX1-2Q9UD57 310 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 OAZ3Q9UMX2 235 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 CMAHPQ9Y471 501 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 PKD1L1Q8TDX9 2849 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 TMEM89A2RUT3 159 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 SAC3D1A6NKF1 404 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF99A8MXY4 864 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-202ENST00000416769 EFCAB9A8MZ26 197 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 MS4A18H0YCH9 400 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 CASQ2O14958 399 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-202ENST00000416769 SYNGR3O43761 229 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 CDC14BO60729 498 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 PTP4A3O75365 173 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 SERPINI2O75830 405 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 ATP6V1G2O95670 118 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 CLPTM1O96005 669 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 ERCC1P07992 297 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-202ENST00000416769 TSPAN19P0C672 248 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 GSTM3P21266 225 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 FPR3P25089 353 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 GTF2E2P29084 291 aaKnown RBP11.03□□□□□ -0.64
LINC00339-202ENST00000416769 GIPRP48546 466 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 PTDSS1P48651 473 aaKnown RBP11.03□□□□□ -0.64
LINC00339-202ENST00000416769 DAPP51397 102 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 ZP4Q12836 540 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 MS4A18Q3C1V0 323 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 ZBED5Q49AG3 693 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 FAHD2BQ6P2I3 314 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-202ENST00000416769 FAHD1Q6P587 224 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 NHLRC1Q6VVB1 395 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 PEG10Q86TG7 708 aaKnown RBP11.03□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF584Q8IVC4 421 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 C20orf196Q8IYI0 205 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 LRRC17Q8N6Y2 441 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 AQP11Q8NBQ7 271 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 ADPRHL1Q8NDY3 354 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 OR5J2Q8NH18 312 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 DNAJC9Q8WXX5 260 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 TAF15Q92804 592 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00339-202ENST00000416769 FAHD2AQ96GK7 314 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 GPA33Q99795 319 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 C1QTNF5Q9BXJ0 243 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 OR51B6Q9H340 312 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF556Q9HAH1 456 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
LINC00339-202ENST00000416769 TRRAPQ9Y4A5 3859 aa11.02□□□□□ -0.64
LINC00339-202ENST00000416769 LOC102725191A0A1B0GVB3 256 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 UNC119BA6NIH7 251 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 CDC42EP2O14613 210 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 PPIHO43447 177 aaKnown RBP11.02□□□□□ -0.65
LINC00339-202ENST00000416769 CCL2P13500 99 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-202ENST00000416769 EPHA1P21709 976 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 GPR4P46093 362 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 COMPP49747 757 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-202ENST00000416769 HILS1P60008 231 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 MVKQ03426 396 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 PMS2P3Q13401 168 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 CAMK2DQ13557 499 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 RAB39AQ14964 217 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 GSG1Q2KHT4 349 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 KDM4DQ6B0I6 523 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 ZNF813Q6ZN06 617 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 ZBTB49Q6ZSB9 765 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 OAFQ86UD1 273 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 C3orf56Q8N813 242 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 ATG16L2Q8NAA4 619 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 GCDHQ92947 438 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-202ENST00000416769 EME1Q96AY2 570 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms