RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CTXN1P60606 82 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 TMEM255AQ5JRV8 349 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 FAM205BPQ63HN1 556 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 IGFN1Q86VF2 1251 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 TREML1Q86YW5 311 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 BPIFB2Q8N4F0 458 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 PRRC1Q96M27 445 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 C7orf69Q9H7B7 122 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 ELOVL3Q9HB03 270 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 UBAP1Q9NZ09 502 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 ZDHHC8Q9ULC8 765 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 A0A1W2PPL8 197 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 TMEM89A2RUT3 159 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 A6NIZ1 184 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 FAM220BPB1ANY3 271 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 ICMTO60725 284 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 NGFP01138 241 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 MSR1P21757 451 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 RAP1BP61224 184 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 RAP1AP62834 184 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 MAPRE2Q15555 327 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 ZNF774Q6NX45 483 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 ARL9Q6T311 187 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 HDXQ7Z353 690 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 ZER1Q7Z7L7 766 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 MICU2Q8IYU8 434 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 PCYOX1LQ8NBM8 494 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 OR2T12Q8NG77 320 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 OR51A7Q8NH64 312 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 ST7LQ8TDW4 575 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 GEMIN6Q8WXD5 167 aaKnown RBP12.23□□□□□ -0.45
PAF1-202ENST00000416728 ZMYND19Q96E35 227 aaPredicted RBP12.23□□□□□ -0.45
PAF1-202ENST00000416728 C4orf45Q96LM5 186 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 DIRC2Q96SL1 478 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 SLC6A7Q99884 636 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 GID8Q9NWU2 228 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 A4GNTQ9UNA3 340 aa12.23□□□□□ -0.45
PAF1-202ENST00000416728 TRAV27A0A087WT01 109 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 C12orf71A8MTZ7 269 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 TIMM8AO60220 97 aaPredicted RBP12.22□□□□□ -0.45
PAF1-202ENST00000416728 CD55P08174 381 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 TROVE2P10155 538 aaKnown RBP eCLIP12.22□□□□□ -0.45
PAF1-202ENST00000416728 SELENOWP63302 87 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 LCN2P80188 198 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 TNFAIP6P98066 277 aaPredicted RBP12.22□□□□□ -0.45
PAF1-202ENST00000416728 KLF10Q13118 480 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 ENDOGQ14249 297 aaKnown RBP12.22□□□□□ -0.45
PAF1-202ENST00000416728 MTX3Q5HYI7 312 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 FOXL2NBQ6ZUU3 175 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 SYT9Q86SS6 491 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 OAFQ86UD1 273 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 NRMQ8IXM6 262 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 LZICQ8WZA0 190 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 MSL2Q9HCI7 577 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 KLHL21Q9UJP4 597 aa12.22□□□□□ -0.45
PAF1-202ENST00000416728 NDRG4Q9ULP0 352 aaKnown RBP12.22□□□□□ -0.45
PAF1-202ENST00000416728 LOC100653049A0A140TA62 436 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 EFCAB9A8MZ26 197 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 SPRY1O43609 319 aaPredicted RBP12.21□□□□□ -0.45
PAF1-202ENST00000416728 FOXH1O75593 365 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 KRT34O76011 436 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 ABHD16AO95870 558 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 GSTM3P21266 225 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 FPR2P25090 351 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 YAP1P46937 504 aaKnown RBP12.21□□□□□ -0.45
PAF1-202ENST00000416728 ANKDD1AQ495B1 522 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 OFCC1Q8IZS5 231 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 LRRC75AQ8NAA5 344 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 NPEPL1Q8NDH3 523 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 FNDC11Q9BVV2 318 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 VIPAS39Q9H9C1 493 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 SAR1AQ9NR31 198 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 POLE4Q9NR33 117 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 RHCGQ9UBD6 479 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 OPN4Q9UHM6 478 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 NPTNQ9Y639 398 aa12.21□□□□□ -0.45
PAF1-202ENST00000416728 ELOVL7A1L3X0 281 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 H7C1C5 153 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 PRSS23O95084 383 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 IFNW1P05000 195 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 SBK2P0C263 348 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 TNFSF4P23510 183 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 RPL4P36578 427 aaKnown RBP12.2□□□□□ -0.46
PAF1-202ENST00000416728 LCN6P62502 163 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 SCRN3Q0VDG4 424 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 PSG7Q13046 419 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 TRAM2Q15035 370 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 SPRNQ5BIV9 151 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 OR13C2Q8NGS9 318 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 C22orf15Q8WYQ4 148 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 DCLRE1CQ96SD1 692 aaKnown RBP12.2□□□□□ -0.46
PAF1-202ENST00000416728 WACQ9BTA9 647 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 MAN2C1Q9NTJ4 1040 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 TMEM106BQ9NUM4 274 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 TBCCD1Q9NVR7 557 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 DCAF16Q9NXF7 216 aa12.2□□□□□ -0.46
PAF1-202ENST00000416728 PPIAL4EA0A075B759 164 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 PPIAL4CA0A0B4J2A2 164 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 PPIAL4DF5H284 164 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 J3KTA2 159 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms