RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 PXKQ7Z7A4 578 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 ZNF540Q8NDQ6 660 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 TRUB1Q8WWH5 349 aaKnown RBP17.78■□□□□ 0.44
PTPRU-203ENST00000415600 SEC14L4Q9UDX3 406 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 PCDHGB1Q9Y5G3 927 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 CEPT1Q9Y6K0 416 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 M0R3G1 203 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 TRAF3IP2O43734 574 aaPredicted RBP17.77■□□□□ 0.44
PTPRU-203ENST00000415600 PIP5K1CO60331 668 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 OR4A8P0C604 315 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 AHCYP23526 432 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 SNRPGP62308 76 aaKnown RBP17.77■□□□□ 0.44
PTPRU-203ENST00000415600 XAF1Q6GPH4 301 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 WDR88Q6ZMY6 472 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 PRIMA1Q86XR5 153 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 C20orf196Q8IYI0 205 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 TMEM123Q8N131 208 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 NUP37Q8NFH4 326 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 OR6N1Q8NGY5 312 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 TMEM239Q8WW34 195 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 PIMREGQ9BSJ6 248 aa17.77■□□□□ 0.44
PTPRU-203ENST00000415600 BGLAPP02818 100 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 TUBA1BP68363 451 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 CDK5Q00535 292 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 PRKCDQ05655 676 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 PIGFQ07326 219 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 EFNB3Q15768 340 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 NEDD8Q15843 81 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 TMEM249Q2WGJ8 235 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 CNPY1Q3B7I2 92 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 CARD17Q5XLA6 110 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 VHLLQ6RSH7 139 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 PTCHD4Q6ZW05 846 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 TUBA1AQ71U36 451 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 LSRQ86X29 649 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-203ENST00000415600 CLDN22Q8N7P3 220 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 OR5J2Q8NH18 312 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 HTRA1Q92743 480 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 MPP4Q96JB8 637 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 SIGLEC11Q96RL6 698 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 VRK1Q99986 396 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-203ENST00000415600 RAB1BQ9H0U4 201 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 ZNF442Q9H7R0 627 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 FKBP14Q9NWM8 211 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 ERVK-18Q9QC07 812 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 PSORS1C1Q9UIG5 152 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 FBXL3Q9UKT7 428 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 SPEF1Q9Y4P9 236 aa17.76■□□□□ 0.43
PTPRU-203ENST00000415600 MS4A18H0YCH9 400 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 H3BSA7 217 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 RGS10O43665 173 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 HIST1H2ABP04908 130 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 PCMT1P22061 227 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 USF1P22415 310 aaPredicted RBP17.75■□□□□ 0.43
PTPRU-203ENST00000415600 RBM34P42696 430 aaKnown RBP17.75■□□□□ 0.43
PTPRU-203ENST00000415600 GIPRP48546 466 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 IDH3GP51553 393 aaPredicted RBP17.75■□□□□ 0.43
PTPRU-203ENST00000415600 GINS1Q14691 196 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 RAB39AQ14964 217 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 MS4A18Q3C1V0 323 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 CHRFAM7AQ494W8 412 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 HIST3H2AQ7L7L0 130 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 TEX47Q8TBZ9 253 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 C10orf105Q8TEF2 133 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 HIST1H2ACQ93077 130 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 ZNF426Q9BUY5 554 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 ULBP2Q9BZM5 246 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 NELFAQ9H3P2 528 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 TMEM5Q9Y2B1 443 aa17.75■□□□□ 0.43
PTPRU-203ENST00000415600 SLC35F4A4IF30 521 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 M0R129 80 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 PLPP3O14495 311 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 GPR4P46093 362 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 PPOXP50336 477 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 PRSS48Q7RTY5 328 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 MEX3DQ86XN8 651 aaKnown RBP17.74■□□□□ 0.43
PTPRU-203ENST00000415600 OR8J1Q8NGP2 316 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 PLA2G12AQ9BZM1 189 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 SLC19A3Q9BZV2 496 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 CCDC90BQ9GZT6 254 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 EGLN3Q9H6Z9 239 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 CLN6Q9NWW5 311 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 IL20Q9NYY1 176 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 MED31Q9Y3C7 131 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 CHD3Q12873 2000 aaKnown RBP17.74■□□□□ 0.43
PTPRU-203ENST00000415600 CR1P17927 2039 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 CCDC160A6NGH7 325 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 MT-ND2P03891 347 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 ADORA3P0DMS8 318 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 NPR2P20594 1047 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 CSNK1A1P48729 337 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 ADIPOQQ15848 244 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 GSG1Q2KHT4 349 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 MST1LQ2TV78 715 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 CYB5R2Q6BCY4 276 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 SLC27A4Q6P1M0 643 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 LINC00114Q6XXX2 140 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 ZNF813Q6ZN06 617 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 AHSA2Q719I0 299 aa17.74■□□□□ 0.43
PTPRU-203ENST00000415600 SVOPQ8N4V2 548 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms