RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 OGG1O15527 345 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 PLPP2O43688 288 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 WISP2O76076 250 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 GABARAPO95166 117 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 SERPINA3P01011 423 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 IL2RAP01589 272 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 HLA-DPB1P04440 258 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 CRHP06850 196 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 OR8G3PP0DMU2 310 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 GADD45AP24522 165 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 GABRA5P31644 462 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 RPS27P42677 84 aaKnown RBP12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 PCBD1P61457 104 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 ROM1Q03395 351 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 AQP6Q13520 282 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 SSX1Q16384 188 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 CNPY1Q3B7I2 92 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF684Q5T5D7 378 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 C1orf185Q5T7R7 199 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 C19orf48Q6RUI8 117 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 PLXDC2Q6UX71 529 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 GFRALQ6UXV0 394 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 NUFIP2Q7Z417 695 aaKnown RBP12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 LINC00346Q8IVM7 164 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 SNRNP40Q96DI7 357 aaKnown RBP12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLAMF6Q96DU3 332 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 PELI1Q96FA3 418 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZFP3Q96NJ6 502 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 NIPAL2Q9H841 368 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 ELOVL3Q9HB03 270 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 EMC7Q9NPA0 242 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 EXOSC4Q9NPD3 245 aaKnown RBP12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLC7A10Q9NS82 523 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 CENPMQ9NSP4 180 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 TMEM38BQ9NVV0 291 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLCO1C1Q9NYB5 712 aa12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 MRM2Q9UI43 246 aaKnown RBP12.58□□□□□ -0.4
HMGA1P1-201ENST00000415560 ALPK2Q86TB3 2170 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 PNMA8CA0A1B0GUJ8 204 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 H3BMQ9 156 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 PSMD9O00233 223 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 MAGEB4O15481 346 aaPredicted RBP12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 RPP14O95059 124 aaKnown RBP12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 LALBAP00709 142 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 CST2P09228 141 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 GALP22466 123 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 OR3A2P47893 321 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 LIPNQ5VXI9 398 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 FBXW9Q5XUX1 488 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 ARL9Q6T311 187 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 ATCAYQ86WG3 371 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 ALDH16A1Q8IZ83 802 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 RFLNBQ8N5W9 214 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 OR6K3Q8NGY3 331 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 RNF133Q8WVZ7 376 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 ALKBH3Q96Q83 286 aaPredicted RBP12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 CHCHD6Q9BRQ6 235 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF416Q9BWM5 594 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 NAA50Q9GZZ1 169 aaKnown RBP12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 TP63Q9H3D4 680 aaPredicted RBP12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 C12orf49Q9H741 205 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZMIZ1Q9ULJ6 1067 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 KLHDC2Q9Y2U9 406 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 PHF3Q92576 2039 aaKnown RBP12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 SPTBN4Q9H254 2564 aa12.57□□□□□ -0.4
HMGA1P1-201ENST00000415560 GTF3C1Q12789 2109 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 PIEZO1Q92508 2521 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 LOC100506127A0A0U1RQW1 187 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 TRDV1A0A1B0GX56 115 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 MBD3L4A6NDZ8 208 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 MBD3L3A6NE82 208 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 MBD3L5A6NJ08 208 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 TTLL8A6PVC2 850 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF878C9JN71 531 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 GPRIN2O60269 458 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 CNOT4O95628 575 aaKnown RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 APOC1P02654 83 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 NR4A1P22736 598 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 HSD11B1P28845 292 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 DCTDP32321 178 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 TIMP3P35625 211 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 PSMB10P40306 273 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 TDGF1P3P51864 188 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 LSM3P62310 102 aaKnown RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 GRB2P62993 217 aaKnown RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 FAPQ12884 760 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 ALKBH1Q13686 389 aaKnown RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 CDK5R1Q15078 307 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF829Q3KNS6 432 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 DMKNQ6E0U4 476 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 PAMR1Q6UXH9 720 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 LRRN1Q6UXK5 716 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 RPTNQ6XPR3 784 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF813Q6ZN06 617 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLC16A12Q6ZSM3 486 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLC16A14Q7RTX9 510 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms