RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 LDLRAD4O15165 306 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SLC22A2O15244 555 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 TPST1O60507 370 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SHOX2O60902 331 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SEC14L2O76054 403 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ACTL6AO96019 429 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 LDLRP01130 860 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 LINGO3P0C6S8 592 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 PABPC4LP0CB38 370 aaKnown RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 GKN3PP0CG01 181 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 GP1BBP13224 206 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 PRG2P13727 222 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF708P17019 499 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 GPX2P18283 190 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 PGCP20142 388 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 RPS4Y1P22090 263 aaKnown RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ME2P23368 584 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SHC1P29353 583 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 TIMP3P35625 211 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 CDKN1AP38936 164 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 PSMB10P40306 273 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SLC7A2P52569 658 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SUCLG1P53597 346 aaKnown RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 CLDN18P56856 261 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 CLDN20P56880 219 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 NUP107P57740 925 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 PSME3P61289 254 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SIRPAP78324 504 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 KCNJ10P78508 379 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 LIPEQ05469 1076 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ART3Q13508 389 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 GNA13Q14344 377 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 GANABQ14697 944 aaKnown RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 QPRTQ15274 297 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ACSF3Q4G176 576 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 LIN52Q52LA3 116 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 LRRC23Q53EV4 343 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF311Q5JNZ3 666 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 GKAP1Q5VSY0 366 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 RTL6Q6ICC9 239 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 NANOGP8Q6NSW7 305 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 B3GNT6Q6ZMB0 384 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 Q6ZPB1 254 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 CHMP1BQ7LBR1 199 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 RRM2BQ7LG56 351 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 P4HA3Q7Z4N8 544 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 TBC1D26Q86UD7 250 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 GRAMD2AQ8IUY3 354 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 CCDC71Q8IV32 467 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 MISPQ8IVT2 679 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 MARVELD2Q8N4S9 558 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 RNF148Q8N7C7 305 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 C11orf65Q8NCR3 313 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 OR5W2Q8NH69 310 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 VANGL1Q8TAA9 524 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 GPR119Q8TDV5 335 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SSC4DQ8WTU2 575 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF524Q96C55 264 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 INTS12Q96CB8 462 aaKnown RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 FBXO17Q96EF6 278 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 CMTM3Q96MX0 182 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 WDFY2Q96P53 400 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 PIGQQ9BRB3 760 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 PINK1Q9BXM7 581 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 LAT2Q9GZY6 243 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 MTHFD2LQ9H903 347 aaPredicted RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 NANOGQ9H9S0 305 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 EFCAB1Q9HAE3 211 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 CTPS2Q9NRF8 586 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 CMTM6Q9NX76 183 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 THUMPD1Q9NXG2 353 aaKnown RBP3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ADA2Q9NZK5 511 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 KCNS2Q9ULS6 477 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 SLC35A3Q9Y2D2 325 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF835Q9Y2P0 537 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 MEMO1Q9Y316 297 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 PCDHGB5Q9Y5G0 923 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 FAM215AQ9Y5M1 114 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 DSPPQ9NZW4 1301 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 ADGRG4Q8IZF6 3080 aa3.85□□□□□ -1.79
PTPRK-209ENST00000415046 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 TMED7-TICAM2A0A0A6YYA0 188 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 A0A0J9YW62 118 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 NKX2-6A6NCS4 301 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 CFAP73A6NFT4 308 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 FAM220BPB1ANY3 271 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 C16orf97H3BN30 126 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 M0QX08 132 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 TNFSF11O14788 317 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 EFNA2O43921 213 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 CXCL13O43927 109 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 WDR1O75083 606 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 SERPINB7O75635 380 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 SYNGR4O95473 234 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 ZNF682O95780 498 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 APOHP02749 345 aaPredicted RBP3.84□□□□□ -1.79
PTPRK-209ENST00000415046 GABRA1P14867 456 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 UQCRBP14927 111 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 ETS2P15036 469 aa3.84□□□□□ -1.79
PTPRK-209ENST00000415046 NCK1P16333 377 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms