RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ZNF813Q6ZN06 617 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 DPPA2Q7Z7J5 298 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 LUZP2Q86TE4 346 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 CCDC36Q8IYA8 594 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 ZNF786Q8N393 782 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 ZNF808Q8N4W9 903 aaPredicted RBP11.62□□□□□ -0.55
CNN3-203ENST00000415017 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 WDR31Q8NA23 367 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 OR4F15Q8NGB8 312 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 OR2T27Q8NH04 317 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 FGFBP3Q8TAT2 258 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 IPCEF1Q8WWN9 437 aaPredicted RBP11.62□□□□□ -0.55
CNN3-203ENST00000415017 FBXO17Q96EF6 278 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 FOXN4Q96NZ1 517 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 INTS14Q96SY0 518 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 USB1Q9BQ65 265 aaKnown RBP11.62□□□□□ -0.55
CNN3-203ENST00000415017 CDCA4Q9BXL8 241 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 RERGLQ9H628 205 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 SEC61A2Q9H9S3 476 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 EMC7Q9NPA0 242 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 SLC17A5Q9NRA2 495 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 DIMT1Q9UNQ2 313 aaKnown RBP11.62□□□□□ -0.55
CNN3-203ENST00000415017 MYRFQ9Y2G1 1151 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 TPRKBQ9Y3C4 175 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 PCDHGB1Q9Y5G3 927 aa11.62□□□□□ -0.55
CNN3-203ENST00000415017 IRGMA1A4Y4 181 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 OR5H1A6NKK0 313 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 TRIM64CA6NLI5 447 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 ZNF593O00488 134 aaPredicted RBP11.61□□□□□ -0.55
CNN3-203ENST00000415017 LYZL6O75951 148 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 FADS2O95864 444 aaKnown RBP11.61□□□□□ -0.55
CNN3-203ENST00000415017 CDK1P06493 297 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 LIMS3P0CW19 117 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 LIMS4P0CW20 117 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 DCKP27707 260 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 UGT2B10P36537 528 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 CHN2P52757 468 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 RPS7P62081 194 aaKnown RBP11.61□□□□□ -0.55
CNN3-203ENST00000415017 MVKQ03426 396 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 FAM27E3Q08E93 113 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 AQP6Q13520 282 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 TBRG1Q3YBR2 411 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 KLHL24Q6TFL4 600 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 SEZ6L2Q6UXD5 910 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 SHFQ7M4L6 423 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 DPY19L4Q7Z388 723 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 P2RY8Q86VZ1 359 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 ERI1Q8IV48 349 aaKnown RBP11.61□□□□□ -0.55
CNN3-203ENST00000415017 FAM169BQ8N8A8 192 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 ZNF485Q8NCK3 441 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 OR51G2Q8NGK0 314 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 OR10S1Q8NGN2 331 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 SGCDQ92629 289 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 HTRA1Q92743 480 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 MAP6Q96JE9 813 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 ZNF696Q9H7X3 374 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 OBP2BQ9NPH6 170 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 PNRC2Q9NPJ4 139 aaKnown RBP11.61□□□□□ -0.55
CNN3-203ENST00000415017 INPP5EQ9NRR6 644 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 GALNT8Q9NY28 637 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 SCN3BQ9NY72 215 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 COPS3Q9UNS2 423 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 KLHDC2Q9Y2U9 406 aa11.61□□□□□ -0.55
CNN3-203ENST00000415017 LRRK2Q5S007 2527 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 PRR32B1ATL7 298 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 EEF1E1-BLOC1S5C9J1V9 151 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 EEF1E1O43324 174 aaKnown RBP11.6□□□□□ -0.55
CNN3-203ENST00000415017 ZG16O60844 167 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 FAM20BO75063 409 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 SEC14L2O76054 403 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 PLA2G2AP14555 144 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 ZNF823P16415 610 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 PAX7P23759 505 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 ADAM8P78325 824 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 ROM1Q03395 351 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 ZNF85Q03923 595 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 ST3GAL4Q11206 333 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 SGCAQ16586 387 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 KRTAP27-1Q3LI81 207 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 HIKESHIQ53FT3 197 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 TIMM23BQ5SRD1 257 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 C9orf135Q5VTT2 229 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 OTPQ5XKR4 325 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 C22orf34Q6ZV56 151 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 BHLHA15Q7RTS1 189 aaPredicted RBP11.6□□□□□ -0.55
CNN3-203ENST00000415017 PRSS48Q7RTY5 328 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 SLC35F2Q8IXU6 374 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 ACBD4Q8NC06 268 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 ZNF540Q8NDQ6 660 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 STEAP2Q8NFT2 490 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 RNASE6Q93091 150 aaKnown RBP11.6□□□□□ -0.55
CNN3-203ENST00000415017 TMEM80Q96HE8 168 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 AMELYQ99218 206 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 SH3GL3Q99963 347 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 COPS4Q9BT78 406 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 CRNNQ9UBG3 495 aaPredicted RBP11.6□□□□□ -0.55
CNN3-203ENST00000415017 BLOC1S6Q9UL45 172 aa11.6□□□□□ -0.55
CNN3-203ENST00000415017 ANKHD1Q8IWZ3 2542 aaKnown RBP11.6□□□□□ -0.55
CNN3-203ENST00000415017 A0A1W2PQL4 384 aaPredicted RBP11.59□□□□□ -0.55
CNN3-203ENST00000415017 C12orf71A8MTZ7 269 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms