RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZNF782Q6ZMW2 699 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 KCTD20Q7Z5Y7 419 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 FGD2Q7Z6J4 655 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 UEVLDQ8IX04 471 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ARIH2OSQ8N7S6 290 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 TEX19Q8NA77 164 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 CPNE4Q96A23 557 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF582Q96NG8 517 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 OXGR1Q96P68 337 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 OPALINQ96PE5 141 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 HDHD5Q9BXW7 423 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 SLC25A18Q9H1K4 315 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 FBXO9Q9UK97 447 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZFYVE26Q68DK2 2539 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF670-ZNF695F2Z2N8 137 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 DCTN6O00399 190 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 DNPH1O43598 174 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 MPZL2O60487 215 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 AQP8O94778 261 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 IGHMP01871 453 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF3P17036 446 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 NTF4P34130 210 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 SLC17A1Q14916 467 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 TMEM201Q5SNT2 666 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 LCN1P1Q5VSP4 162 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 AADACL4Q5VUY2 407 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF324BQ6AW86 544 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 PCSK4Q6UW60 755 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 CXXC5Q7LFL8 322 aaKnown RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 HDDC2Q7Z4H3 204 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 OR5M9Q8NGP3 310 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZNRF4Q8WWF5 429 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ASB10Q8WXI3 467 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZC3HAV1LQ96H79 300 aaKnown RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 CCDC120Q96HB5 630 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF385AQ96PM9 386 aaKnown RBP13.8□□□□□ -0.2
SHMT2-202ENST00000414700 SNTG1Q9NSN8 517 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 SLC23A1Q9UHI7 598 aa13.8□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF716A6NP11 495 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 TRIM77I1YAP6 450 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 PLA2G10O15496 165 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 CRYABP02511 175 aaKnown RBP13.79□□□□□ -0.2
SHMT2-202ENST00000414700 SCG5P05408 212 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 ZNF43P17038 809 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 MAP2K3P46734 347 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 BIDP55957 195 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 RAB25P57735 213 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 MAB21L1Q13394 359 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 OCLNQ16625 522 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 EEF1A1P5Q5VTE0 462 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 ABLIM2Q6H8Q1 611 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 FCRLAQ7L513 359 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 OR51L1Q8NGJ5 315 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 SNRNP40Q96DI7 357 aaKnown RBP13.79□□□□□ -0.2
SHMT2-202ENST00000414700 GPR137Q96N19 417 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 CNTNAP3BQ96NU0 1288 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 NAA11Q9BSU3 229 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-202ENST00000414700 CNTNAP3Q9BZ76 1288 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 PRDM14Q9GZV8 571 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 RACGAP1Q9H0H5 632 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 ING1Q9UK53 422 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-202ENST00000414700 DOCK7Q96N67 2140 aa13.79□□□□□ -0.2
SHMT2-202ENST00000414700 SH3D21A4FU49 640 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 FABP12A6NFH5 140 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 PRR23D1E9PI22 279 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-202ENST00000414700 PRR23D2P0DMB1 279 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-202ENST00000414700 IL32P24001 234 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 IKZF1Q13422 519 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 SLC25A30Q5SVS4 291 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 PDSS1Q5T2R2 415 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 ZBTB37Q5TC79 503 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 GPR139Q6DWJ6 353 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 JAZF1Q86VZ6 243 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 ZIC4Q8N9L1 334 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 SYT14Q8NB59 555 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 OR9K2Q8NGE7 335 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 TRMT61AQ96FX7 289 aaKnown RBP13.78□□□□□ -0.2
SHMT2-202ENST00000414700 HYLS1Q96M11 299 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 DCLRE1CQ96SD1 692 aaKnown RBP13.78□□□□□ -0.2
SHMT2-202ENST00000414700 SYT4Q9H2B2 425 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 OR51V1Q9H2C8 321 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 MIXL1Q9H2W2 232 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 LIN7BQ9HAP6 207 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 CLN6Q9NWW5 311 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 ASB6Q9NWX5 421 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 RASD1Q9Y272 281 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 LOC102725191A0A1B0GVB3 256 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 MYL12BO14950 172 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 SCO1O75880 301 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 SLC22A5O76082 557 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 APOL3O95236 402 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 TGM6O95932 706 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 IFNGP01579 166 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 ADRA2AP08913 450 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 MYL12AP19105 171 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 TALDO1P37837 337 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 CLDN17P56750 224 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 CTAG1AP78358 180 aa13.78□□□□□ -0.2
SHMT2-202ENST00000414700 MRPL28Q13084 256 aaKnown RBP13.78□□□□□ -0.2
SHMT2-202ENST00000414700 CAMK2DQ13557 499 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms