RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNF416Q9BWM5 594 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 CDADC1Q9BWV3 514 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 OR2H1Q9GZK4 316 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 HEATR1Q9H583 2144 aaKnown RBP12.72□□□□□ -0.37
CHD1-202ENST00000414220 KIF17Q9P2E2 1029 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 B9D1Q9UPM9 204 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 AP4S1Q9Y587 144 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 MYO9AB2RTY4 2548 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 ROS1P08922 2347 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 CADP27708 2225 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 RAI1Q7Z5J4 1906 aaPredicted RBP12.71□□□□□ -0.37
CHD1-202ENST00000414220 LCKP06239 509 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 COX5BP10606 129 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 ZNF823P16415 610 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 FASP25445 335 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 APEX1P27695 318 aaKnown RBP12.71□□□□□ -0.37
CHD1-202ENST00000414220 EVX1P49640 407 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 ERFP50548 548 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 PSG4Q00888 419 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 AQP6Q13520 282 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 SWI5Q1ZZU3 235 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 CLEC12BQ2HXU8 276 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 SLC35F1Q5T1Q4 408 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 C11orf71Q6IPW1 123 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 ZNF584Q8IVC4 421 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 LNX2Q8N448 690 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 SDR9C7Q8NEX9 313 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 GJC3Q8NFK1 279 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 AKR7LQ8NHP1 331 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
CHD1-202ENST00000414220 TMUB1Q9BVT8 246 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 RACGAP1Q9H0H5 632 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 MS4A5Q9H3V2 200 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 DYNLRB1Q9NP97 96 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 RPRD1BQ9NQG5 326 aaKnown RBP12.71□□□□□ -0.37
CHD1-202ENST00000414220 VNN3Q9NY84 501 aa12.71□□□□□ -0.37
CHD1-202ENST00000414220 HRNRQ86YZ3 2850 aaPredicted RBP12.7□□□□□ -0.38
CHD1-202ENST00000414220 C5orf49A4QMS7 147 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 RIIAD1A6NNX1 92 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 FAM171A2A8MVW0 826 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 BHLHE40O14503 412 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 SGCEO43556 437 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 HMGN1P05114 100 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 ZNF3P17036 446 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 BLVRAP53004 296 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 UCP2P55851 309 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 KCNMB1Q16558 191 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 HIPK1Q86Z02 1210 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 PROKR2Q8NFJ6 384 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 OR2AJ1Q8NGZ0 328 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 MRPL24Q96A35 216 aaKnown RBP12.7□□□□□ -0.38
CHD1-202ENST00000414220 NIPSNAP1Q9BPW8 284 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 EMC7Q9NPA0 242 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 ARMC1Q9NVT9 282 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 PLEK2Q9NYT0 353 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 CSMD2Q7Z408 3487 aa12.7□□□□□ -0.38
CHD1-202ENST00000414220 PRRC2AP48634 2157 aaKnown RBP12.69□□□□□ -0.38
CHD1-202ENST00000414220 A0A1W2PPW3 197 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 SSX4O60224 188 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 DOK2O60496 412 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 TIPRLO75663 272 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 SOX14O95416 240 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 IGHV4-39P01824 125 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 MT-ND5P03915 603 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 CSF3P09919 207 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 FAM157BP0CG42 384 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 CCL2P13500 99 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 OSMP13725 252 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 PAICSP22234 425 aaKnown RBP12.69□□□□□ -0.38
CHD1-202ENST00000414220 TUBG1P23258 451 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 POU1F1P28069 291 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 GCH1P30793 250 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 PPOXP50336 477 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 EFNA4P52798 201 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 ENDOGQ14249 297 aaKnown RBP12.69□□□□□ -0.38
CHD1-202ENST00000414220 SLC27A4Q6P1M0 643 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 SHQ1Q6PI26 577 aaKnown RBP12.69□□□□□ -0.38
CHD1-202ENST00000414220 CLEC2AQ6UVW9 174 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 UGT2A3Q6UWM9 527 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 ASRGL1Q7L266 308 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 ZBTB46Q86UZ6 589 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 OR6V1Q8N148 313 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 SVOPLQ8N434 492 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 ICA1LQ8NDH6 482 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 CPEB3Q8NE35 698 aaKnown RBP12.69□□□□□ -0.38
CHD1-202ENST00000414220 OR5K1Q8NHB7 308 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 SYNPRQ8TBG9 265 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 SNX33Q8WV41 574 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 IPCEF1Q8WWN9 437 aaPredicted RBP12.69□□□□□ -0.38
CHD1-202ENST00000414220 C18orf12Q96KH6 178 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 COG8Q96MW5 612 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 FOXN4Q96NZ1 517 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 RHNO1Q9BSD3 238 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 MYOZ1Q9NP98 299 aaPredicted RBP12.69□□□□□ -0.38
CHD1-202ENST00000414220 TUBG2Q9NRH3 451 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 SLCO1C1Q9NYB5 712 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 ENOPH1Q9UHY7 261 aa12.69□□□□□ -0.38
CHD1-202ENST00000414220 DUSP13Q9UII6 198 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms