RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 BOLA3Q53S33 107 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 ATAD3BQ5T9A4 648 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 HSDL2Q6YN16 418 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 H2AFVQ71UI9 128 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 PGAP1Q75T13 922 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 MTERF4Q7Z6M4 381 aaKnown RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CTAGE6Q86UF2 777 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 PHF13Q86YI8 300 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 MFSD6LQ8IWD5 586 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 MREGQ8N565 214 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 RNF10Q8N5U6 811 aaKnown RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 PRELID2Q8N945 189 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 FBXL13Q8NEE6 735 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 STEAP2Q8NFT2 490 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR51G1Q8NGK1 321 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR9G1Q8NH87 305 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 PPTC7Q8NI37 304 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 MARCH1Q8TCQ1 289 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 ACTRT1Q8TDG2 376 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 MAIP1Q8WWC4 291 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCDC127Q96BQ5 260 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 ITCHQ96J02 903 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCDC42Q96M95 316 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 RNF2Q99496 336 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 MRPL45Q9BRJ2 306 aaKnown RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 TMEM246Q9BRR3 403 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 ROGDIQ9GZN7 287 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 DEFB127Q9H1M4 99 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 IL26Q9NPH9 171 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCL28Q9NRJ3 127 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNHIT6Q9NWK9 470 aaKnown RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 RAB20Q9NX57 234 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 HOXC10Q9NYD6 342 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 RBAKQ9NYW8 714 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CLCF1Q9UBD9 225 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 SNX6Q9UNH7 406 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 BZW2Q9Y6E2 419 aaKnown RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 PLXNB3Q9ULL4 1909 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 A0A0G2JLM5 398 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 PGRMC1O00264 195 aaKnown RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 ATP8B1O43520 1251 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 HCRTO43612 131 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 SNAI2O43623 268 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 ICOSLGO75144 302 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 GZMAP12544 262 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 CYBAP13498 195 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 ADRB3P13945 408 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCDC130P13994 396 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 TBPP20226 339 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 IVDP26440 423 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 FMO3P31513 532 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 HSPA9P38646 679 aaKnown RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 DUSP3P51452 185 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 MYL6P60660 151 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 SPIBQ01892 262 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 SLC25A11Q02978 314 aaKnown RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 DMTNQ08495 405 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 MGAT3Q09327 533 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 INCA1Q0VD86 236 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 OXA1LQ15070 435 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZBTB6Q15916 424 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 DUSP7Q16829 419 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 PTPN20Q4JDL3 420 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 TTMPQ5BVD1 217 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 XKR4Q5GH76 650 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 C8orf74Q6P047 294 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 OTUD6AQ7L8S5 288 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 SLC26A11Q86WA9 606 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 PAQR7Q86WK9 346 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 KRT222Q8N1A0 295 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF786Q8N393 782 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 MFSD9Q8NBP5 474 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR10G9Q8NGN4 311 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 ACOT11Q8WXI4 607 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 UFD1Q92890 307 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 CMTM7Q96FZ5 175 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 CPB2Q96IY4 423 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 TTC25Q96NG3 672 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 OXGR1Q96P68 337 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 ALS2CR12Q96Q35 445 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 PEBP4Q96S96 227 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 C11orf70Q9BRQ4 267 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZSCAN5AQ9BUG6 496 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 RIOK2Q9BVS4 552 aaKnown RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 RANBP3Q9H6Z4 567 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 GLRX2Q9NS18 164 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 THUMPD1Q9NXG2 353 aaKnown RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 QPCTLQ9NXS2 382 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 EURLQ9NYK6 297 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 TMCO1Q9UM00 188 aa2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 NUP210Q8TEM1 1887 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P11-201ENST00000413899 DENND4AQ7Z401 1863 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 MTCL1Q9Y4B5 1905 aaKnown RBP2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 C2orf16Q68DN1 1984 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 TRAV26-1A0A087WT03 109 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 NSG1A0A0A6YYJ2 146 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 IQANK1A0A1B0GTG1 560 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 TCRBV9S1A1TA0A576 114 aa2.33□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF233A6NK53 670 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms