RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 COA3Q9Y2R0 106 aaPredicted RBP12.73□□□□□ -0.37
LIMS4-201ENST00000413601 C5orf49A4QMS7 147 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 M0R233 179 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 ACOT8O14734 319 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 KHDRBS3O75525 346 aaKnown RBP12.72□□□□□ -0.37
LIMS4-201ENST00000413601 MPZL1O95297 269 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 CLPTM1O96005 669 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 ERCC1P07992 297 aaPredicted RBP12.72□□□□□ -0.37
LIMS4-201ENST00000413601 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
LIMS4-201ENST00000413601 SLC25A16P16260 332 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 PCSK6P29122 969 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 RAD52P43351 418 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 GDI2P50395 445 aaKnown RBP12.72□□□□□ -0.37
LIMS4-201ENST00000413601 FAM98BQ52LJ0 330 aaKnown RBP12.72□□□□□ -0.37
LIMS4-201ENST00000413601 ALDH16A1Q8IZ83 802 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 OR4C15Q8NGM1 316 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 POM121Q96HA1 1249 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 TSSK2Q96PF2 358 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 IFT27Q9BW83 186 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 TRIM15Q9C019 465 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 NUAK2Q9H093 628 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 VNN3Q9NY84 501 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 U3KQV3 271 aa12.72□□□□□ -0.37
LIMS4-201ENST00000413601 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 ABCA1O95477 2261 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 A0A1W2PPW3 197 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 DCTN6O00399 190 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 GYG2O15488 501 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 CCNB2O95067 398 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 STAMBPO95630 424 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 GASTP01350 101 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 DAOP14920 347 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 HIST1H1CP16403 213 aaKnown RBP12.71□□□□□ -0.37
LIMS4-201ENST00000413601 WNT5AP41221 380 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 DBPQ10586 325 aaPredicted RBP12.71□□□□□ -0.37
LIMS4-201ENST00000413601 TRAP1Q12931 704 aaKnown RBP12.71□□□□□ -0.37
LIMS4-201ENST00000413601 ALKBH6Q3KRA9 238 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 OR2T5Q6IEZ7 315 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 ZNF770Q6IQ21 691 aaPredicted RBP12.71□□□□□ -0.37
LIMS4-201ENST00000413601 ZNF620Q6ZNG0 422 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 SYT9Q86SS6 491 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 GLB1L2Q8IW92 636 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 ZNF101Q8IZC7 436 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 LINC00471Q8N535 108 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 OR1J1Q8NGS3 322 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 OR2T29Q8NH02 315 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 OR4K13Q8NH42 304 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 SYNPRQ8TBG9 265 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 NEU4Q8WWR8 484 aaPredicted RBP12.71□□□□□ -0.37
LIMS4-201ENST00000413601 C11orf40Q8WZ69 217 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 SLC7A6OSQ96CW6 309 aaPredicted RBP12.71□□□□□ -0.37
LIMS4-201ENST00000413601 NMNAT3Q96T66 252 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 BCL2L14Q9BZR8 327 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 MS4A5Q9H3V2 200 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 EGLN3Q9H6Z9 239 aa12.71□□□□□ -0.37
LIMS4-201ENST00000413601 MYOZ1Q9NP98 299 aaPredicted RBP12.71□□□□□ -0.37
LIMS4-201ENST00000413601 EIF3KQ9UBQ5 218 aaKnown RBP12.71□□□□□ -0.37
LIMS4-201ENST00000413601 LOC390937A0A1W2PQ73 354 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 INAFM1C9JVW0 142 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 ARPC3O15145 178 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 GPANK1O95872 356 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 TP53P04637 393 aaPredicted RBP12.7□□□□□ -0.38
LIMS4-201ENST00000413601 RAP2AP10114 183 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 NAT2P11245 290 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 ZNF250P15622 560 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 NOS3P29474 1203 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 CENPAP49450 140 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 KLF3P57682 345 aaPredicted RBP12.7□□□□□ -0.38
LIMS4-201ENST00000413601 LOXL1Q08397 574 aaPredicted RBP12.7□□□□□ -0.38
LIMS4-201ENST00000413601 DNAL1Q4LDG9 190 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 CLEC12AQ5QGZ9 265 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 SLC35F1Q5T1Q4 408 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 LEG1Q6P5S2 330 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 JAZF1Q86VZ6 243 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 POP5Q969H6 163 aaKnown RBP12.7□□□□□ -0.38
LIMS4-201ENST00000413601 PIMREGQ9BSJ6 248 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 REEP1Q9H902 201 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 SRA1Q9HD15 236 aaKnown RBP12.7□□□□□ -0.38
LIMS4-201ENST00000413601 TAAR3PQ9P1P4 343 aa12.7□□□□□ -0.38
LIMS4-201ENST00000413601 SAMHD1Q9Y3Z3 626 aaKnown RBP12.7□□□□□ -0.38
LIMS4-201ENST00000413601 TLN2Q9Y4G6 2542 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 NF1P21359 2839 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 IGLV3-9A0A075B6K5 115 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 LYNX1G3V0Z9 82 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 NDUFS8O00217 210 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 SGCEO43556 437 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 IDH3BO43837 385 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 DOK2O60496 412 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 RENP00797 406 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 NGFP01138 241 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 LYNX1P0DP58 116 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 USF1P22415 310 aaPredicted RBP12.69□□□□□ -0.38
LIMS4-201ENST00000413601 CRABP1P29762 137 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 NR4A2P43354 598 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 SELENOVP59797 346 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 LSM6P62312 80 aaKnown RBP12.69□□□□□ -0.38
LIMS4-201ENST00000413601 SCRN3Q0VDG4 424 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 AQP6Q13520 282 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms