RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 SPATA46Q5T0L3 261 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 LCN1P1Q5VSP4 162 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 ZNF813Q6ZN06 617 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 SERPINA12Q8IW75 414 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 IZUMO1Q8IYV9 350 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 MCFD2Q8NI22 146 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 NEIL3Q8TAT5 605 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 ZCCHC14Q8WYQ9 949 aaKnown RBP8.61□□□□□ -1.03
SMPD4-203ENST00000412570 B3GAT2Q9NPZ5 323 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 POLE4Q9NR33 117 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 ASF1BQ9NVP2 202 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 MRM2Q9UI43 246 aaKnown RBP8.61□□□□□ -1.03
SMPD4-203ENST00000412570 DAPK2Q9UIK4 370 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 ENPP5Q9UJA9 477 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 PCDHGB7Q9Y5F8 929 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 LRRK2Q5S007 2527 aa8.61□□□□□ -1.03
SMPD4-203ENST00000412570 GBX2P52951 348 aaPredicted RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 SYT6Q5T7P8 510 aaPredicted RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 HES5Q5TA89 166 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 GPR139Q6DWJ6 353 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 FAM57BQ71RH2 274 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 CD163Q86VB7 1156 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 FAM109AQ8N4B1 249 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 OR5D18Q8NGL1 313 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 OR52N5Q8NH56 324 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 FGFBP3Q8TAT2 258 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 SLC25A43Q8WUT9 341 aaPredicted RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 RFT1Q96AA3 541 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 FRMD6Q96NE9 622 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 GLTPQ9NZD2 209 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 EXOSC1Q9Y3B2 195 aaKnown RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 NOX1Q9Y5S8 564 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 FLNCQ14315 2725 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 EXPH5Q8NEV8 1989 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 TMEM269A0A1B0GVZ9 245 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 CIB4A0PJX0 185 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 KHDRBS3O75525 346 aaKnown RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 AGFG2O95081 481 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 SLC2A5P22732 501 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 CLDN18P56856 261 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 RAC3P60763 192 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 SLC17A1Q14916 467 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 ZNF239Q16600 458 aaKnown RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 ZNF774Q6NX45 483 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 VASH1Q7L8A9 365 aaPredicted RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 ZNF367Q7RTV3 350 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 GLB1L2Q8IW92 636 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 NOXO1Q8NFA2 376 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 DVL3Q92997 716 aaPredicted RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 CEP19Q96LK0 163 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 POTEKPQ9BYX7 375 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 BAIAP2Q9UQB8 552 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 FLVCR1Q9Y5Y0 555 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 SHISA3A0PJX4 238 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 ZFPL1O95159 310 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 GFRA1P56159 465 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 GALEQ14376 348 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 TBR1Q16650 682 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 TMEM201Q5SNT2 666 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 VWA1Q6PCB0 445 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 ZNF519Q8TB69 540 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 CDCA4Q9BXL8 241 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 TIGARQ9NQ88 270 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 TXNL4BQ9NX01 149 aaKnown RBP8.6□□□□□ -1.03
SMPD4-203ENST00000412570 B3GNT3Q9Y2A9 372 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 MSRB2Q9Y3D2 182 aa8.6□□□□□ -1.03
SMPD4-203ENST00000412570 GJE1A6NN92 205 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 TAF4O00268 1085 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 GABRPO00591 440 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 HSF2Q03933 536 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 ACSM3Q53FZ2 586 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 LINGO2Q7L985 606 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 RBMXL3Q8N7X1 1067 aaKnown RBP8.59□□□□□ -1.03
SMPD4-203ENST00000412570 ZIC4Q8N9L1 334 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 RAB2BQ8WUD1 216 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 OR2M2Q96R28 347 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 ING3Q9NXR8 418 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 FZR1Q9UM11 496 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 TRIM64CA6NLI5 447 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 IL32P24001 234 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 SPOCK1Q08629 439 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 SLC18B1Q6NT16 456 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 TIGD4Q8IY51 512 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 SLAMF6Q96DU3 332 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 YIPF6Q96EC8 236 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 KCNK17Q96T54 332 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 OCEL1Q9H607 264 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 LRP12Q9Y561 859 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 HIVEP3Q5T1R4 2406 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 USF3Q68DE3 2245 aa8.59□□□□□ -1.03
SMPD4-203ENST00000412570 A0A087WZY1 265 aa8.59□□□□□ -1.04
SMPD4-203ENST00000412570 IGLV1-36A0A0B4J1U3 117 aa8.59□□□□□ -1.04
SMPD4-203ENST00000412570 ZNF701M0R085 212 aaPredicted RBP8.59□□□□□ -1.04
SMPD4-203ENST00000412570 ATXN7O15265 892 aaPredicted RBP8.59□□□□□ -1.04
SMPD4-203ENST00000412570 PGA4P0DJD7 388 aa8.59□□□□□ -1.04
SMPD4-203ENST00000412570 PGA3P0DJD8 388 aa8.59□□□□□ -1.04
SMPD4-203ENST00000412570 CRABP1P29762 137 aa8.59□□□□□ -1.04
SMPD4-203ENST00000412570 P2RY4P51582 365 aa8.59□□□□□ -1.04
SMPD4-203ENST00000412570 ARF1P84077 181 aaKnown RBP8.59□□□□□ -1.04
SMPD4-203ENST00000412570 UBE2UQ5VVX9 321 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms