RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 GRK5P34947 590 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 FABP6P51161 128 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 ARHGDIAP52565 204 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 LSM6P62312 80 aaKnown RBP11.37□□□□□ -0.59
HDAC8-210ENST00000412342 CDK5Q00535 292 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 SWI5Q1ZZU3 235 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 SPNS3Q6ZMD2 512 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 HIPK1Q86Z02 1210 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 MUC15Q8N387 334 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 PARP8Q8N3A8 854 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 ATG16L2Q8NAA4 619 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 SLC30A7Q8NEW0 376 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 AKR7LQ8NHP1 331 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 DNAJC9Q8WXX5 260 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 CENPNQ96H22 339 aaPredicted RBP11.37□□□□□ -0.59
HDAC8-210ENST00000412342 POM121L2Q96KW2 1035 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 PKP2Q99959 881 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 KCNS3Q9BQ31 491 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 WACQ9BTA9 647 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 GSX2Q9BZM3 304 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 C1orf198Q9H425 327 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 RERGLQ9H628 205 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 SRA1Q9HD15 236 aaKnown RBP11.37□□□□□ -0.59
HDAC8-210ENST00000412342 CCNB1IP1Q9NPC3 277 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 CMC2Q9NRP2 79 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 CBLN4Q9NTU7 201 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 FAIMQ9NVQ4 179 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 KLHL21Q9UJP4 597 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 ARID1AO14497 2285 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 CELSR1Q9NYQ6 3014 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 LOC100509620A0A075B734 347 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 C12orf71A8MTZ7 269 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 G3V2T6 193 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 GPRIN2O60269 458 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 SMPD2O60906 423 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 THBS4P35443 961 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 PTH2RP49190 550 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 SLC25A1P53007 311 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 PCBD1P61457 104 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 HIST1H3AP68431 136 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 PPP2R2BQ00005 443 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 HSF2Q03933 536 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 SNTB2Q13425 540 aaKnown RBP11.36□□□□□ -0.59
HDAC8-210ENST00000412342 AQP6Q13520 282 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 DAG1Q14118 895 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 GINS1Q14691 196 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 EFNB3Q15768 340 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 MEP1BQ16820 701 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 HIST2H3PS2Q5TEC6 136 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 AGAP6Q5VW22 663 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 KDM4DQ6B0I6 523 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 KRT80Q6KB66 452 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 ZNF774Q6NX45 483 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 SLC27A4Q6P1M0 643 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 ZFP1Q6P2D0 407 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 HIST2H3AQ71DI3 136 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 FBXL14Q8N1E6 418 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 RAB3IPQ96QF0 476 aaPredicted RBP11.36□□□□□ -0.59
HDAC8-210ENST00000412342 HCAR1Q9BXC0 346 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 SEMA6AQ9H2E6 1030 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 KCNN2Q9H2S1 579 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 ZNF556Q9HAH1 456 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 SLC25A19Q9HC21 320 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 PAPOLBQ9NRJ5 636 aaKnown RBP11.36□□□□□ -0.59
HDAC8-210ENST00000412342 MRPL22Q9NWU5 206 aaKnown RBP11.36□□□□□ -0.59
HDAC8-210ENST00000412342 ASH2LQ9UBL3 628 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 TMEFF2Q9UIK5 374 aaPredicted RBP11.36□□□□□ -0.59
HDAC8-210ENST00000412342 TIMM10BQ9Y5J6 103 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 LHFPL6Q9Y693 200 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 ITPR3Q14573 2671 aa11.36□□□□□ -0.59
HDAC8-210ENST00000412342 IQCMA0A1B0GVH7 501 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 TMEM129A0AVI4 362 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 FAM171A2A8MVW0 826 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 ICMTO60725 284 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 MITFO75030 526 aaPredicted RBP11.35□□□□□ -0.59
HDAC8-210ENST00000412342 PTHP01270 115 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 OR4A8P0C604 315 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 CLUP10909 449 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 PSKH1P11801 424 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 ZNF23P17027 643 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 STOMP27105 288 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 PYCR1P32322 319 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 GLRXP35754 106 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 GGT2P36268 569 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 CDKN1AP38936 164 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 WNT5AP41221 380 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 GUCA1AP43080 201 aaPredicted RBP11.35□□□□□ -0.59
HDAC8-210ENST00000412342 CRISP1P54107 249 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 GLO1Q04760 184 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 PLP2Q04941 152 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 GABPB1Q06547 395 aaPredicted RBP11.35□□□□□ -0.59
HDAC8-210ENST00000412342 SCRN3Q0VDG4 424 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 TBC1D28Q2M2D7 210 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 CCDC92Q53HC0 331 aaPredicted RBP11.35□□□□□ -0.59
HDAC8-210ENST00000412342 LINC01590Q5TEZ4 76 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 VHLLQ6RSH7 139 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 LYPD4Q6UWN0 246 aa11.35□□□□□ -0.59
HDAC8-210ENST00000412342 VASH1Q7L8A9 365 aaPredicted RBP11.35□□□□□ -0.59
HDAC8-210ENST00000412342 ZDHHC13Q8IUH4 622 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms