RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TRAPPC6AO75865 159 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 AHSA1O95433 338 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 TBX6O95947 436 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 ACTL6AO96019 429 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 GP1BAP07359 652 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 RBMY1DP0C7P1 496 aaKnown RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 TRIM49P0CI25 452 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 TRIM49CP0CI26 452 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 RBMY1A1P0DJD3 496 aaKnown RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 CALM1P0DP23 149 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 CALM2P0DP24 149 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 CALM3P0DP25 149 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 CNR1P21554 472 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 BTDP43251 543 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 KIR2DS2P43631 304 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 RAB7AP51149 207 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 RORCP51449 518 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 XKP51811 444 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 SUB1P53999 127 aaKnown RBP eCLIP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 UGT2B15P54855 530 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 HILS1P60008 231 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 SLC25A11Q02978 314 aaKnown RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 IFFO1Q0D2I5 559 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 UNC119Q13432 240 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 OR4D1Q15615 310 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 TAL2Q16559 108 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 KYAT1Q16773 422 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 KLF17Q5JT82 389 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 MFSD14CQ5VZR4 134 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 C8orf74Q6P047 294 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 CNIH2Q6PI25 160 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 FAM151BQ6UXP7 276 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 FUNDC1Q8IVP5 155 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF614Q8N883 585 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 WDR31Q8NA23 367 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 NECAP1Q8NC96 275 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 MDS2Q8NDY4 140 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 OR8J2Q8NGG1 315 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 MRAPQ8TCY5 172 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 DNAJC1Q96KC8 554 aaKnown RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 SHCBP1LQ9BZQ2 653 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 PLEKHA1Q9HB21 404 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 IMPAD1Q9NX62 359 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 MAT2BQ9NZL9 334 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF256Q9Y2P7 627 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 V9GY05 133 aa3.55□□□□□ -1.84
BRCA1-204ENST00000412061 PHF3Q92576 2039 aaKnown RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 COL22A1Q8NFW1 1626 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-204ENST00000412061 TRAV8-7A0A075B6U6 113 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 A0A0A6YYD5 115 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 KIR2DL5BA0A0G2JN68 375 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 KIR2DL5BA0A0G2JPC4 375 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 TMEM213A2RRL7 107 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 A6NIZ1 184 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 DHRS7CA6NNS2 312 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 FAM166BA8MTA8 275 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 FAM220BPB1ANY3 271 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 SEC14L6B5MCN3 397 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ERVV-1B6SEH8 477 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 SULT1C2O00338 296 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 SAP18O00422 153 aaKnown RBP3.54□□□□□ -1.84
BRCA1-204ENST00000412061 TOX3O15405 576 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-204ENST00000412061 SGCEO43556 437 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ZG16O60844 167 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 PSIP1O75475 530 aaKnown RBP3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ADAP1O75689 374 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ATP5HO75947 161 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ARG1P05089 322 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 PET100P0DJ07 73 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 LAMP1P11279 417 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 FOLR1P15328 257 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 CXCR2P25025 360 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 LMO2P25791 158 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 RAP1BP61224 184 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF92Q03936 586 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 TWF1Q12792 350 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 SLC39A6Q13433 755 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 TPBGQ13641 420 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 CYLC2Q14093 348 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ZBTB6Q15916 424 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ZBED5Q49AG3 693 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 OR5M10Q6IEU7 315 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 AHSA2Q719I0 299 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 DCXRQ7Z4W1 244 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 TMEM150AQ86TG1 271 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 RDH10Q8IZV5 341 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 KIR2DL5AQ8N109 375 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 VN1R2Q8NFZ6 395 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 OR51A7Q8NH64 312 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 KIR2DL5BQ8NHK3 375 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 CDC26Q8NHZ8 85 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 RASL10AQ92737 203 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 FRAT1Q92837 279 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-204ENST00000412061 CHMP6Q96FZ7 201 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 COL21A1Q96P44 957 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 SCGB3A2Q96PL1 93 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 APOL2Q9BQE5 337 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 TRIM51Q9BSJ1 452 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 CALN1Q9BXU9 219 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms