RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 HINT3Q9NQE9 182 aaKnown RBP12.09□□□□□ -0.47
CPNE1-206ENST00000412056 MRPL22Q9NWU5 206 aaKnown RBP12.09□□□□□ -0.47
CPNE1-206ENST00000412056 USE1Q9NZ43 259 aa12.09□□□□□ -0.47
CPNE1-206ENST00000412056 ST6GALNAC2Q9UJ37 374 aa12.09□□□□□ -0.47
CPNE1-206ENST00000412056 FBXL3Q9UKT7 428 aa12.09□□□□□ -0.47
CPNE1-206ENST00000412056 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
CPNE1-206ENST00000412056 DCHS2Q6V1P9 2916 aa12.09□□□□□ -0.47
CPNE1-206ENST00000412056 IQCMA0A1B0GVH7 501 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 TVP23AA6NH52 213 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 ZAR1LA6NP61 321 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 C12orf71A8MTZ7 269 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 M0R129 80 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 HLA-DQA2P01906 255 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 HMGN1P05114 100 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 ALPLP05186 524 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 CCL2P13500 99 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 APEX1P27695 318 aaKnown RBP12.08□□□□□ -0.48
CPNE1-206ENST00000412056 PCBD1P61457 104 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 LSM6P62312 80 aaKnown RBP12.08□□□□□ -0.48
CPNE1-206ENST00000412056 TEKQ02763 1124 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 HGFACQ04756 655 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 PLP2Q04941 152 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 AQP6Q13520 282 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 SLX4IPQ5VYV7 408 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 ZNF774Q6NX45 483 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 DEPDC4Q8N2C3 294 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 ZNF611Q8N823 705 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 SLC30A7Q8NEW0 376 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 OTULINQ96BN8 352 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 PLEKHA8Q96JA3 519 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 C9orf16Q9BUW7 83 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 GABARAPL3Q9BY60 117 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 RIBC2Q9H4K1 309 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 TVP23BQ9NYZ1 205 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
CPNE1-206ENST00000412056 ENOPH1Q9UHY7 261 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 TIMM10BQ9Y5J6 103 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 LHFPL6Q9Y693 200 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 NBPF19A0A087WUL8 3843 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 CENPEQ02224 2701 aa12.08□□□□□ -0.48
CPNE1-206ENST00000412056 SETXQ7Z333 2677 aaKnown RBP12.07□□□□□ -0.48
CPNE1-206ENST00000412056 PRR23D1E9PI22 279 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-206ENST00000412056 DOK2O60496 412 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ATE1O95260 518 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 RAF1P04049 648 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 PRR23D2P0DMB1 279 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-206ENST00000412056 PSKH1P11801 424 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ZNF35P13682 527 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ANPEPP15144 967 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 CD53P19397 219 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 PAICSP22234 425 aaKnown RBP12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ALDH3A2P51648 485 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ELF3P78545 371 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-206ENST00000412056 SCRN3Q0VDG4 424 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 SNAPC1Q16533 368 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 LINC01590Q5TEZ4 76 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 C12orf73Q69YU5 71 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 PLBD1Q6P4A8 553 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 SYT9Q86SS6 491 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 LINC00346Q8IVM7 164 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 PAQR4Q8N4S7 273 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ZNF511Q8NB15 262 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 BBS1Q8NFJ9 593 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 IL17RDQ8NFM7 739 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 OR10H5Q8NGA6 315 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 OR6K6Q8NGW6 343 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 PTP4A1Q93096 173 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 SLC29A1Q99808 456 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 TEX12Q9BXU0 123 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 CDH20Q9HBT6 801 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ASH2LQ9UBL3 628 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 COMMD3-BMI1R4GMX3 469 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 APCP25054 2843 aa12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
CPNE1-206ENST00000412056 ITPR2Q14571 2701 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 RER1O15258 196 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 SGCEO43556 437 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 PRKYO43930 277 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 PTHP01270 115 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 DANCRP0C864 163 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 STOMP27105 288 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 APLNRP35414 380 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 RPS27P42677 84 aaKnown RBP12.06□□□□□ -0.48
CPNE1-206ENST00000412056 NKX6-1P78426 367 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-206ENST00000412056 SNTB2Q13425 540 aaKnown RBP12.06□□□□□ -0.48
CPNE1-206ENST00000412056 KEAP1Q14145 624 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 TBC1D28Q2M2D7 210 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 ZIK1Q3SY52 487 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-206ENST00000412056 CCDC92Q53HC0 331 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-206ENST00000412056 KRT80Q6KB66 452 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 CORO6Q6QEF8 472 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 VHLLQ6RSH7 139 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 ZBTB49Q6ZSB9 765 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 CXXC5Q7LFL8 322 aaKnown RBP12.06□□□□□ -0.48
CPNE1-206ENST00000412056 OR4F15Q8NGB8 312 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 SMAP2Q8WU79 429 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-206ENST00000412056 EME1Q96AY2 570 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 POM121L2Q96KW2 1035 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms