RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TIMM10BQ9Y5J6 103 aa14.11□□□□□ -0.15
MRPL55-220ENST00000411464 POM121CA8CG34 1229 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 TRAPPC2LH3BP13 241 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 ANGPT2O15123 496 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 TNFRSF1AP19438 455 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 TNFSF4P23510 183 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 PCGF2P35227 344 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 SLC6A9P48067 706 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 TAS2R41P59536 307 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 DEFA6Q01524 100 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 SELPLGQ14242 412 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 LAPTM4AQ15012 233 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 TAF11Q15544 211 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 TUSC1Q2TAM9 212 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 TMEM155Q4W5P6 130 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 PDLIM3Q53GG5 364 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-220ENST00000411464 SPRNQ5BIV9 151 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 MTX3Q5HYI7 312 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 LRRC28Q86X40 367 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-220ENST00000411464 NKAIN4Q8IVV8 208 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 BCL6BQ8N143 479 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-220ENST00000411464 MOSPD2Q8NHP6 518 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 TMEM255BQ8WV15 326 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 NMD3Q96D46 503 aaKnown RBP14.1□□□□□ -0.15
MRPL55-220ENST00000411464 MS4A7Q9GZW8 240 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-220ENST00000411464 WNT5BQ9H1J7 359 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 KAT8Q9H7Z6 458 aaKnown RBP14.1□□□□□ -0.15
MRPL55-220ENST00000411464 PATZ1Q9HBE1 687 aaKnown RBP14.1□□□□□ -0.15
MRPL55-220ENST00000411464 C20orf141Q9NUB4 165 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 POLR3KQ9Y2Y1 108 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-220ENST00000411464 SH3GLB1Q9Y371 365 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 INSIG2Q9Y5U4 225 aa14.1□□□□□ -0.15
MRPL55-220ENST00000411464 IGKV1D-43A0A0B4J1Z2 117 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 ICMTO60725 284 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 IGF2P01344 180 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 RNASE1P07998 156 aaKnown RBP14.09□□□□□ -0.15
MRPL55-220ENST00000411464 CST2P09228 141 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 ZNF12P17014 697 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 GSTM3P21266 225 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 LAP3P28838 519 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 PSG7Q13046 419 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 CDK5R2Q13319 367 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 KLF17Q5JT82 389 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-220ENST00000411464 SLC25A47Q6Q0C1 308 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 DPP10Q8N608 796 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 OR10A6Q8NH74 314 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 FNDC8Q8TC99 324 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 TMEM239Q8WW34 195 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 LIPHQ8WWY8 451 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 SAMD8Q96LT4 415 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 ALG12Q9BV10 488 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 TXNIPQ9H3M7 391 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 TMBIM4Q9HC24 238 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 DCAF16Q9NXF7 216 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 MED31Q9Y3C7 131 aa14.09□□□□□ -0.15
MRPL55-220ENST00000411464 NPIPB13A6NJU9 1138 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 NPIPB4C9JG80 1138 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 MTNR1AP48039 350 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 BTG1P62324 171 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 HNRNPA0Q13151 305 aaKnown RBP14.08□□□□□ -0.16
MRPL55-220ENST00000411464 TOP3AQ13472 1001 aaPredicted RBP14.08□□□□□ -0.16
MRPL55-220ENST00000411464 NFYCQ13952 458 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 ESCO2Q56NI9 601 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 ZNF774Q6NX45 483 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 ZNF283Q8N7M2 679 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 OR2Z1Q8NG97 314 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 C1orf147Q96MC9 270 aaPredicted RBP14.08□□□□□ -0.16
MRPL55-220ENST00000411464 MAN2C1Q9NTJ4 1040 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 OR5V1Q9UGF6 321 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 RIMS3Q9UJD0 308 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 PPP1R3CQ9UQK1 317 aa14.08□□□□□ -0.16
MRPL55-220ENST00000411464 C12orf71A8MTZ7 269 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 CLDN34H7C241 214 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 SURF4O15260 269 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 OR5F1O95221 314 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 ABHD16AO95870 558 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 TSPAN19P0C672 248 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 TUBG1P23258 451 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 SEC61A1P61619 476 aaKnown RBP14.07□□□□□ -0.16
MRPL55-220ENST00000411464 ZMYND11Q15326 602 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 SLC9A3R2Q15599 337 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 VMACQ2NL98 169 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 ALG10Q5BKT4 473 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 CCDC80Q76M96 950 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 OR52E2Q8NGJ4 325 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 ZNF48Q96MX3 618 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-220ENST00000411464 POLR2J2Q9GZM3 115 aaKnown RBP14.07□□□□□ -0.16
MRPL55-220ENST00000411464 POLR2J3Q9H1A7 115 aaKnown RBP14.07□□□□□ -0.16
MRPL55-220ENST00000411464 TUBG2Q9NRH3 451 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 BAG5Q9UL15 447 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 NDRG4Q9ULP0 352 aaKnown RBP14.07□□□□□ -0.16
MRPL55-220ENST00000411464 WNK2Q9Y3S1 2297 aa14.07□□□□□ -0.16
MRPL55-220ENST00000411464 A0A1W2PPL8 197 aa14.06□□□□□ -0.16
MRPL55-220ENST00000411464 A8MXK9 166 aa14.06□□□□□ -0.16
MRPL55-220ENST00000411464 RBMXP38159 391 aaKnown RBP14.06□□□□□ -0.16
MRPL55-220ENST00000411464 MDH2P40926 338 aaKnown RBP14.06□□□□□ -0.16
MRPL55-220ENST00000411464 CRYBA2P53672 197 aa14.06□□□□□ -0.16
MRPL55-220ENST00000411464 RPL27P61353 136 aaKnown RBP14.06□□□□□ -0.16
MRPL55-220ENST00000411464 PIN1Q13526 163 aaPredicted RBP14.06□□□□□ -0.16
MRPL55-220ENST00000411464 SYT9Q86SS6 491 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms