RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TRBC1P01850 177 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 GP1BAP07359 652 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 H2AFZP0C0S5 128 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 SPINK8P0C7L1 97 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZDHHC11BP0C7U3 371 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 LYL1P12980 280 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ABOP16442 354 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 C4BPBP20851 252 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ATICP31939 592 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CASP14P31944 242 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 PSMC2P35998 433 aaKnown RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 SERPINF1P36955 418 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TMEM258P61165 79 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ARG2P78540 354 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 PRLHP81277 87 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 MYL7Q01449 175 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 MTAPQ13126 283 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 STAT4Q14765 748 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 NPTX1Q15818 432 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 EXT1Q16394 746 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TNXAQ16473 311 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 DECR1Q16698 335 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 NDUFA9Q16795 377 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC35G1Q2M3R5 365 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ANKRD55Q3KP44 614 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ODF2Q5BJF6 829 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 MRPL2Q5T653 305 aaKnown RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 HES5Q5TA89 166 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 C22orf39Q6P5X5 142 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC30A9Q6PML9 568 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CFAP77Q6ZQR2 320 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TMEM200AQ86VY9 491 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TICAM2Q86XR7 235 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 MYLK4Q86YV6 388 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLVS1Q8IUQ0 354 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 LINC00346Q8IVM7 164 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 BBS7Q8IWZ6 715 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 C9orf40Q8IXQ3 194 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 LINC00518Q8N0U6 118 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLEC4FQ8N1N0 589 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ELMOD1Q8N336 334 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 BPIFB2Q8N4F0 458 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TTC30BQ8N4P2 665 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 C3orf22Q8N5N4 141 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TTLQ8NG68 377 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR6K6Q8NGW6 343 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 FANK1Q8TC84 345 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ABHD5Q8WTS1 349 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 SSMEM1Q8WWF3 244 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC13A3Q8WWT9 602 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 IL1F10Q8WWZ1 152 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 MCHR2Q969V1 340 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 PYCR2Q96C36 320 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 C1GALT1C1Q96EU7 318 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 C8orf48Q96LL4 319 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TMEM68Q96MH6 324 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 BTBD9Q96Q07 612 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 DEPDC7Q96QD5 511 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CPNE1Q99829 537 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 VRK1Q99986 396 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CENPOQ9BU64 300 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 NUP85Q9BW27 656 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 FUNDC2Q9BWH2 189 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 GPR174Q9BXC1 333 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 KRT23Q9C075 422 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 OPN3Q9H1Y3 402 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR2AG1Q9H205 316 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 FBXO44Q9H4M3 255 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 UBE2ZQ9H832 354 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CDC42SE1Q9NRR8 79 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 KCND2Q9NZV8 630 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 STK26Q9P289 416 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 DBF4Q9UBU7 674 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 DCDC2Q9UHG0 476 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC13A4Q9UKG4 626 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 BARX2Q9UMQ3 279 aaPredicted RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 NENFQ9UMX5 172 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TNFSF18Q9UNG2 199 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TTLL3Q9Y4R7 772 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TRAPPC1Q9Y5R8 145 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 USP16Q9Y5T5 823 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 MAD1L1Q9Y6D9 718 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ROBO3Q96MS0 1386 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLSPNQ9HAW4 1339 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 ARFGEF1Q9Y6D6 1849 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 MAGI1Q96QZ7 1491 aaPredicted RBP-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 A0A0B4J2C4 111 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 LNP1A1A4G5 178 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 TSPAN11A1L157 253 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 GOLGA8IPA6NC78 632 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 TLCD2A6NGC4 264 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 RFPL4AA6NLU0 287 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLCA1A8K7I4 914 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 NCF1CA8MVU1 366 aaPredicted RBP-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 TEX22C9J3V5 150 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 NPIPA7E9PJI5 369 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 RFPL4AL1F8VTS6 287 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 GOLGA8MH3BSY2 632 aa-2.17□□□□□ -2.76
RNU4-88P-201ENST00000411220 APOC4-APOC2K7ER74 178 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms