RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 OR8B4Q96RC9 309 aa0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 P2RX4Q99571 388 aa0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 FICDQ9BVA6 458 aa0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 NHEJ1Q9H9Q4 299 aaPredicted RBP0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 MRPL47Q9HD33 250 aaKnown RBP0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 EXOSC4Q9NPD3 245 aaKnown RBP0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 CHMP2BQ9UQN3 213 aa0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 CDHR2Q9BYE9 1310 aa0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 BRD4O60885 1362 aaPredicted RBP0.06□□□□□ -2.4
RNU2-55P-201ENST00000411146 NUP205Q92621 2012 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 IGLV1-36A0A0B4J1U3 117 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 IGKV1-8A0A0C4DH67 115 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 CLDN3O15551 220 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 AQP9O43315 295 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 PRKAB2O43741 272 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 ZNF73O43830 326 aaPredicted RBP0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 RAMP3O60896 148 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 OR7A10O76100 309 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 FSTL3O95633 263 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 CRYGBP07316 175 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 P0DMU3 169 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 FAM231AP0DMU4 169 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 FAM231CP0DMU5 169 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 CBR1P16152 277 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 RND2P52198 227 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 CDK16Q00536 496 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 MAD2L1BPQ15013 274 aaPredicted RBP0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 KLHL12Q53G59 568 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 MED27Q6P2C8 311 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 UQCC3Q6UW78 93 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 ANKRD23Q86SG2 305 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 NT5DC3Q86UY8 548 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 METTL13Q8N6R0 699 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 CPNE4Q96A23 557 aaPredicted RBP0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 CCDC43Q96MW1 224 aaKnown RBP0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 TMEM237Q96Q45 408 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 SH3GL3Q99963 347 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 LRRN3Q9H3W5 708 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 ASF1BQ9NVP2 202 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 ARGLU1Q9NWB6 273 aaPredicted RBP0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 TMCO1Q9UM00 188 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 MFHAS1Q9Y4C4 1052 aa0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 SPAG9O60271 1321 aaKnown RBP0.05□□□□□ -2.4
RNU2-55P-201ENST00000411146 MUC5ACP98088 5654 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 IGHV1-3A0A0C4DH29 117 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 IGHV7-4-1A0A0J9YVY3 117 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 ARHGEF35A5YM69 484 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 CCDC182A6NF36 153 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 OR5H1A6NKK0 313 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 CHST10O43529 356 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 SCGB2A1O75556 95 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 EIF3GO75821 320 aaKnown RBP eCLIP0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 NCK1P16333 377 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 HLA-DPA1P20036 260 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 CCR1P32246 355 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 ATP5C1P36542 298 aaKnown RBP0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 SELPLGQ14242 412 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 DMC1Q14565 340 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 DGUOKQ16854 277 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 USH1GQ495M9 461 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 C1QTNF12Q5T7M4 302 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 CCDC80Q76M96 950 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 SNX20Q7Z614 316 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 OR10AD1Q8NGE0 317 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 OR2G2Q8NGZ5 317 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 CMTM2Q8TAZ6 248 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 MAIP1Q8WWC4 291 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 CXorf40BQ96DE9 158 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 SLC38A2Q96QD8 506 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 CLCC1Q96S66 551 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 TUBGCP2Q9BSJ2 902 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 MARVELD1Q9BSK0 173 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 KCNJ16Q9NPI9 418 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 UFSP2Q9NUQ7 469 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 TAS2R1Q9NYW7 299 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 CGNQ9P2M7 1197 aaKnown RBP0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 SLC17A7Q9P2U7 560 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 MCTS1Q9ULC4 181 aaKnown RBP0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 ZBED9Q6R2W3 1325 aa0.04□□□□□ -2.4
RNU2-55P-201ENST00000411146 KMT2DO14686 5537 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 IGHV3-49A0A0A0MS15 119 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 RGSL1A5PLK6 1076 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 KRBOX1C9JBD0 128 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 F8WDY8 70 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 H7C417 338 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 CCL21O00585 134 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 FCMRO60667 390 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 C1orf105O95561 183 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 CPSF4O95639 269 aaKnown RBP0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 IGLV7-43P04211 117 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 CD3GP09693 182 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 ACSM4P0C7M7 580 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 OR5H8P0DN80 308 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 PSMB5P28074 263 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 CD1CP29017 333 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 CASP14P31944 242 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 FDFT1P37268 417 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 CEACAM3P40198 252 aa0.03□□□□□ -2.4
RNU2-55P-201ENST00000411146 GALR1P47211 349 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms