RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZNF816-ZNF321PA0A0X1KG74 233 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 DCKP27707 260 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 IFNA8P32881 189 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 KIR3DL2P43630 455 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 GPX6P59796 221 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 KCNJ2P63252 427 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 SNX20Q7Z614 316 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 PIFOQ8TCI5 191 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 SLC41A3Q96GZ6 507 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 TEKT3Q9BXF9 490 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 GORASP2Q9H8Y8 452 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 SLC7A8Q9UHI5 535 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 ENOPH1Q9UHY7 261 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 TRMT112Q9UI30 125 aaKnown RBP1.89□□□□□ -2.11
PMS1-203ENST00000409593 ZNF229Q9UJW7 825 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 ING4Q9UNL4 249 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 HYOU1Q9Y4L1 999 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 UBIAD1Q9Y5Z9 338 aa1.89□□□□□ -2.11
PMS1-203ENST00000409593 SEC16AO15027 2179 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 NDC80O14777 642 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 CEACAM3P40198 252 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 CEBPDP49716 269 aaPredicted RBP1.88□□□□□ -2.11
PMS1-203ENST00000409593 AIF1P55008 147 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 PRMT2P55345 433 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 UBE2NP61088 152 aaKnown RBP1.88□□□□□ -2.11
PMS1-203ENST00000409593 MXD1Q05195 221 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 CDH17Q12864 832 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 GK3PQ14409 553 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 ANKRD26P1Q6NSI1 321 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 METTL13Q8N6R0 699 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 OR52M1Q8NGK5 317 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 PIBF1Q8WXW3 757 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 TBL1YQ9BQ87 522 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 OR52D1Q9H346 318 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 ZNF639Q9UID6 485 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 ST3GAL6Q9Y274 331 aa1.88□□□□□ -2.11
PMS1-203ENST00000409593 IGHV1OR15-9A0A0B4J2B8 117 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 EEDO75530 441 aaKnown RBP1.87□□□□□ -2.11
PMS1-203ENST00000409593 HLA-DQB1P01920 261 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 CD74P04233 296 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 ZNF735P0CB33 412 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 OR5H8P0DN80 308 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 IL1RNP18510 177 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 GLRA2P23416 452 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 MRPS22P82650 360 aaKnown RBP1.87□□□□□ -2.11
PMS1-203ENST00000409593 TGFBIQ15582 683 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 SPIN3Q5JUX0 258 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 SHC3Q92529 594 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 SLC25A46Q96AG3 418 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 PLA2G12AQ9BZM1 189 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 ROPN1BQ9BZX4 212 aaPredicted RBP1.87□□□□□ -2.11
PMS1-203ENST00000409593 CWH43Q9H720 699 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 ZNF586Q9NXT0 402 aa1.87□□□□□ -2.11
PMS1-203ENST00000409593 DHX57Q6P158 1386 aaKnown RBP1.87□□□□□ -2.11
PMS1-203ENST00000409593 FBN1P35555 2871 aaKnown RBP1.87□□□□□ -2.11
PMS1-203ENST00000409593 A0A1W2PPE3 182 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 ZNF716A6NP11 495 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 CDC7O00311 574 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 POLR1CO15160 346 aaPredicted RBP1.86□□□□□ -2.11
PMS1-203ENST00000409593 CLIC3O95833 236 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 IL1BP01584 269 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 F2RP25116 425 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 CDKL3Q8IVW4 592 aaPredicted RBP1.86□□□□□ -2.11
PMS1-203ENST00000409593 LIX1Q8N485 282 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 OR1S2Q8NGQ3 325 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 OR1P1Q8NH06 330 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 MRGPRFQ96AM1 343 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 C1orf198Q9H425 327 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 SLC38A10Q9HBR0 1119 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 IKZF2Q9UKS7 526 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 CARHSP1Q9Y2V2 147 aaKnown RBP1.86□□□□□ -2.11
PMS1-203ENST00000409593 GOLT1BQ9Y3E0 138 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 TSSC4Q9Y5U2 329 aaPredicted RBP1.86□□□□□ -2.11
PMS1-203ENST00000409593 IGKV2-24A0A0C4DH68 120 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 CLRN2A0PK11 232 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 BICDL2A1A5D9 508 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 OR6C74A6NCV1 312 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 H0YJW9 148 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 SERPIND1P05546 499 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 OR8U9P0C7N5 309 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 KITLGP21583 273 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 WARSP23381 471 aaKnown RBP1.86□□□□□ -2.11
PMS1-203ENST00000409593 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 TAF9Q16594 264 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 C6orf226Q5I0X4 101 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 SLC16A13Q7RTY0 426 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 MS4A15Q8N5U1 240 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 TMEM104Q8NE00 496 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 OR6N1Q8NGY5 312 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 SEH1LQ96EE3 360 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 PKNOX2Q96KN3 472 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 GON7Q9BXV9 100 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 KLHL28Q9NXS3 571 aa1.86□□□□□ -2.11
PMS1-203ENST00000409593 LSM7Q9UK45 103 aaKnown RBP1.86□□□□□ -2.11
PMS1-203ENST00000409593 C5orf63A6NC05 138 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 OR52A4PA6NMU1 304 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 FOXE1O00358 373 aaPredicted RBP1.85□□□□□ -2.11
PMS1-203ENST00000409593 SOCS1O15524 211 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 CHST10O43529 356 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 RDH16O75452 317 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms