RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SIAEQ9HAT2 523 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC17A5Q9NRA2 495 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 KCNG2Q9UJ96 466 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 KLHDC2Q9Y2U9 406 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 LHFPL6Q9Y693 200 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 COL12A1Q99715 3063 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 ADGRG4Q8IZF6 3080 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 OR5H1A6NKK0 313 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC22A31A6NKX4 558 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 PSMD9O00233 223 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 RER1O15258 196 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 FARS2O95363 451 aaKnown RBP12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 CLDN1O95832 211 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 CELA3BP08861 270 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 DBTP11182 482 aaKnown RBP12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF32P17041 273 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 HOXC12P31275 282 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 ATP6V1E1P36543 226 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 SH3BGRP55822 239 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 FBXL19-AS1Q494R0 122 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC35D3Q5M8T2 416 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 CFAP77Q6ZQR2 320 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 MDP1Q86V88 176 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 MYPOPQ86VE0 399 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 TIGD4Q8IY51 512 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 INTS14Q96SY0 518 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 MED18Q9BUE0 208 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 CDADC1Q9BWV3 514 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 ADGRL4Q9HBW9 690 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 COPS3Q9UNS2 423 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 MOKQ9UQ07 419 aa12.31□□□□□ -0.44
CHRNA1-204ENST00000409323 TRIM64CA6NLI5 447 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 PRSS44E7EML9 344 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 MAGEB4O15481 346 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 FAM20BO75063 409 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 THBDP07204 575 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 ADRA2AP08913 450 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 NPR2P20594 1047 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 MTNR1AP48039 350 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 ENTPD1P49961 510 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF83P51522 516 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC25A30Q5SVS4 291 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 LCN1P1Q5VSP4 162 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 FAM27BQ5VT28 67 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 MEDAGQ5VYS4 303 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 OR7E24Q6IFN5 339 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF786Q8N393 782 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 STEAP2Q8NFT2 490 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 RFKQ969G6 155 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 AMELYQ99218 206 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 CNN2Q99439 309 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 HDHD5Q9BXW7 423 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 CCNB1IP1Q9NPC3 277 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 SCOCQ9UIL1 159 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 CLEC18AA5D8T8 446 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 A6NHS1 94 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 CCL2P13500 99 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 IDH3GP51553 393 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 RAB1AP62820 205 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 MVKQ03426 396 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 EIF2B1Q14232 305 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 RAB39AQ14964 217 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 PPA1Q15181 289 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 KCTD21Q4G0X4 260 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 C6orf141Q5SZD1 244 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF774Q6NX45 483 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 CLEC18BQ6UXF7 455 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF627Q7L945 461 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 DCXRQ7Z4W1 244 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC35F2Q8IXU6 374 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 CLEC18CQ8NCF0 446 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 C1orf162Q8NEQ5 155 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 OR10H4Q8NGA5 316 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 THEM6Q8WUY1 208 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC7A6Q92536 515 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 LGALS12Q96DT0 336 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 LRRC46Q96FV0 321 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 MAP6Q96JE9 813 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 Q96MT0 163 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 NPAP1Q9NZP6 1156 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 GDF2Q9UK05 429 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 MYRFQ9Y2G1 1151 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC25A15Q9Y619 301 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 DOPEY2Q9Y3R5 2298 aa12.3□□□□□ -0.44
CHRNA1-204ENST00000409323 ICE1Q9Y2F5 2266 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 DOPEY1Q5JWR5 2465 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 TENM4Q6N022 2769 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 PRR32B1ATL7 298 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 PTGES3LE9PB15 166 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 M0R1B8 84 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC1A7O00341 560 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 CST2P09228 141 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 MMP7P09237 267 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 SBK2P0C263 348 aa12.29□□□□□ -0.44
CHRNA1-204ENST00000409323 COL8A1P27658 744 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms