RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 BLOC1S5-TXNDC5H3BN57 136 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 ERLIN1O75477 346 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 GPANK1O95872 356 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 PGA4P0DJD7 388 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 PGA3P0DJD8 388 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 PPIAL4GP0DN37 164 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 IRF2P14316 349 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 ACADSP16219 412 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 CD247P20963 164 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 MDH2P40926 338 aaKnown RBP6.54□□□□□ -1.36
LSM5-202ENST00000409292 SLC6A9P48067 706 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 ERVS71-1P61550 626 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 PPP1CBP62140 327 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 BTG1P62324 171 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 GNB2P62879 340 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 MRPS34P82930 218 aaKnown RBP6.54□□□□□ -1.36
LSM5-202ENST00000409292 CD47Q08722 323 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 MELKQ14680 651 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 SLC9A3R2Q15599 337 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 ZNF74Q16587 644 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 GTDC1Q4AE62 458 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 SPATA46Q5T0L3 261 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 LCE3BQ5TA77 95 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 GPR157Q5UAW9 335 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 LEG1Q6P5S2 330 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 LRFN4Q6PJG9 635 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 SLC30A8Q8IWU4 369 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 C1orf87Q8N0U7 546 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 PAQR4Q8N4S7 273 aaPredicted RBP6.54□□□□□ -1.36
LSM5-202ENST00000409292 ANKRD42Q8N9B4 389 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 DEFB108BQ8NET1 73 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 KLF14Q8TD94 323 aaPredicted RBP6.54□□□□□ -1.36
LSM5-202ENST00000409292 IPCEF1Q8WWN9 437 aaPredicted RBP6.54□□□□□ -1.36
LSM5-202ENST00000409292 RASSF5Q8WWW0 418 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 GTF2H4Q92759 462 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 VPS33AQ96AX1 596 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 SAMD8Q96LT4 415 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 WACQ9BTA9 647 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 OR2J1Q9GZK6 312 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 TMEM38AQ9H6F2 299 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 SMURF2Q9HAU4 748 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 NOX4Q9NPH5 578 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 INIPQ9NRY2 104 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 SLC6A13Q9NSD5 602 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 NKIRAS1Q9NYS0 192 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.54□□□□□ -1.36
LSM5-202ENST00000409292 PPP1R3CQ9UQK1 317 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 POLR3KQ9Y2Y1 108 aaPredicted RBP6.54□□□□□ -1.36
LSM5-202ENST00000409292 TIMM10BQ9Y5J6 103 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 CACNG2Q9Y698 323 aa6.54□□□□□ -1.36
LSM5-202ENST00000409292 SVEP1Q4LDE5 3571 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 TRAPPC13A5PLN9 417 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 CPSF4LA6NMK7 179 aaKnown RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 C12orf71A8MTZ7 269 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 A8MXK9 166 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 LRRN3E7EW58 273 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 KPNA4O00629 521 aaPredicted RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 POLR3GO15318 223 aaPredicted RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 ABHD16AO95870 558 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 IGHV2-70P01814 119 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 RPS2P15880 293 aaKnown RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 ZNF32P17041 273 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 MDKP21741 143 aaPredicted RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 AQP1P29972 269 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 MMP15P51511 669 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 RAG2P55895 527 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 RPL15P61313 204 aaKnown RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 CYP51A1Q16850 503 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 INTS11Q5TA45 600 aaKnown RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 SLC2A7Q6PXP3 512 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 WDR88Q6ZMY6 472 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 C9orf139Q6ZV77 190 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 PATL1Q86TB9 770 aaKnown RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 LRRC28Q86X40 367 aaPredicted RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 C11orf65Q8NCR3 313 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 OR2Z1Q8NG97 314 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 FGFBP3Q8TAT2 258 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 GEMIN6Q8WXD5 167 aaKnown RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 MARS2Q96GW9 593 aaKnown RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 FAM71F1Q96KD3 344 aaPredicted RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 ZNF347Q96SE7 839 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 NDEL1Q9GZM8 345 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 C20orf27Q9GZN8 174 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 PAIP1Q9H074 479 aaKnown RBP6.53□□□□□ -1.36
LSM5-202ENST00000409292 TAS2R5Q9NYW4 299 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 MIOXQ9UGB7 285 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 IL19Q9UHD0 177 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 ZNF281Q9Y2X9 895 aa6.53□□□□□ -1.36
LSM5-202ENST00000409292 HTR3EA5X5Y0 456 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 ZSCAN5BA6NJL1 495 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 TPST1O60507 370 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 MMP7P09237 267 aaPredicted RBP6.52□□□□□ -1.37
LSM5-202ENST00000409292 FUT1P19526 365 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 RAB6AP20340 208 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 OMGP23515 440 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 MPV17P39210 176 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 SRP9P49458 86 aaKnown RBP6.52□□□□□ -1.37
LSM5-202ENST00000409292 SCRN3Q0VDG4 424 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 ENTPD8Q5MY95 495 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms