RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ADCYAP1P18509 176 aa11.75□□□□□ -0.53
PTPRN-202ENST00000409251 EIF1AXP47813 144 aaKnown RBP11.75□□□□□ -0.53
PTPRN-202ENST00000409251 LPAL2Q16609 132 aa11.75□□□□□ -0.53
PTPRN-202ENST00000409251 VN1R4Q7Z5H5 301 aa11.75□□□□□ -0.53
PTPRN-202ENST00000409251 CCDC107Q8WV48 283 aa11.75□□□□□ -0.53
PTPRN-202ENST00000409251 JSRP1Q96MG2 331 aaPredicted RBP11.75□□□□□ -0.53
PTPRN-202ENST00000409251 LAMP5Q9UJQ1 280 aa11.75□□□□□ -0.53
PTPRN-202ENST00000409251 RIF1Q5UIP0 2472 aaKnown RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 H0YGG7 62 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 BHLHE40O14503 412 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 RDH16O75452 317 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 MED6O75586 246 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 RORAP35398 523 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 MAP3K8P41279 467 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 RAG2P55895 527 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 ARF3P61204 181 aaPredicted RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 ACTC1P68032 377 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 ACTA1P68133 377 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 NRROSQ86YC3 692 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 OR9A4Q8NGU2 314 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 EIF5A2Q9GZV4 153 aaKnown RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 METTL8Q9H825 291 aaKnown RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 ST6GALNAC2Q9UJ37 374 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 CSAG2Q9Y5P2 127 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 NPTNQ9Y639 398 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 A0A1W2PPE3 182 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 TUBAL3A6NHL2 446 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 OR6C65A6NJZ3 312 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 SLC33A1O00400 549 aaPredicted RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 AGTR1P30556 359 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 GNALP38405 381 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 DHRS2Q13268 280 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 GFOD2Q3B7J2 385 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 SHISA6Q6ZSJ9 500 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 TMPPEQ6ZT21 453 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 ASPGQ86U10 573 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 COMMD2Q86X83 199 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 RERGQ96A58 199 aaPredicted RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 MED17Q9NVC6 651 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 SIGLEC7Q9Y286 467 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 GGT3PA6NGU5 568 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 RFPL4AA6NLU0 287 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 RFPL4AL1F8VTS6 287 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 SLC22A6Q4U2R8 563 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 RPL22L1Q6P5R6 122 aaKnown RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 ZAR1Q86SH2 424 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 NAXDQ8IW45 347 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 FAM24BQ8N5W8 94 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 GVQW1Q8N7I0 195 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 FGF11Q92914 225 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 PIGQQ9BRB3 760 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 PCBD2Q9H0N5 130 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 PRO1933Q9H354 126 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 KIR3DX1Q9H7L2 352 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 MTHFD2LQ9H903 347 aaPredicted RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 RXFP3Q9NSD7 469 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 SLC22A13Q9Y226 551 aa11.74□□□□□ -0.53
PTPRN-202ENST00000409251 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.74□□□□□ -0.53
PTPRN-202ENST00000409251 CACNA1DQ01668 2161 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 SHISA7A6NL88 538 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 ZNF736B4DX44 427 aaPredicted RBP11.73□□□□□ -0.53
PTPRN-202ENST00000409251 OR6A2O95222 327 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 MPGP29372 298 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 ACTA2P62736 377 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 ACTG2P63267 376 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 MRPS21P82921 87 aaKnown RBP11.73□□□□□ -0.53
PTPRN-202ENST00000409251 ARHGAP19Q14CB8 494 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 ZIC1Q15915 447 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 WDSUB1Q8N9V3 476 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 OR6K3Q8NGY3 331 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 NAA11Q9BSU3 229 aaPredicted RBP11.73□□□□□ -0.53
PTPRN-202ENST00000409251 POTEKPQ9BYX7 375 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 ACKR4Q9NPB9 350 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 PRDM7Q9NQW5 492 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 A0A1B0GWA3 101 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 SNRPGP15A8MWD9 76 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 OR2A4O95047 310 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 HTR3BO95264 441 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 CPN1P15169 458 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 NDUFS1P28331 727 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 GFERP55789 205 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 DEFA6Q01524 100 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 C5orf46Q6UWT4 87 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 OR2L5Q8NG80 312 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 SLC25A36Q96CQ1 311 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 HAVCR1Q96D42 359 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 OR2A7Q96R45 310 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 SULT4A1Q9BR01 284 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 COMMD4Q9H0A8 199 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 H7C1Q1 480 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 OR10H2O60403 315 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 ADRA2CP18825 462 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 DPP4P27487 766 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 F2RL1P55085 397 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 ACER2Q5QJU3 275 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 PXKQ7Z7A4 578 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 SLC35F3Q8IY50 421 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 GABRG1Q8N1C3 465 aa11.73□□□□□ -0.53
PTPRN-202ENST00000409251 TMEM52Q8NDY8 209 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms