RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TMEM200CA6NKL6 621 aa15.08■□□□□ 0
NUP50-203ENST00000407019 VSTM2BA6NLU5 285 aa15.08■□□□□ 0
NUP50-203ENST00000407019 CREBL2O60519 120 aaPredicted RBP15.08■□□□□ 0
NUP50-203ENST00000407019 KDM4BO94953 1096 aa15.08■□□□□ 0
NUP50-203ENST00000407019 CPN1P15169 458 aa15.08■□□□□ 0
NUP50-203ENST00000407019 IGFBP3P17936 291 aaPredicted RBP15.08■□□□□ 0
NUP50-203ENST00000407019 DCDP81605 110 aaKnown RBP15.08■□□□□ 0
NUP50-203ENST00000407019 TEX261Q6UWH6 196 aa15.08■□□□□ 0
NUP50-203ENST00000407019 BIVMQ86UB2 503 aa15.08■□□□□ 0
NUP50-203ENST00000407019 MEIOBQ8N635 442 aa15.08■□□□□ 0
NUP50-203ENST00000407019 OR4C16Q8NGL9 310 aa15.08■□□□□ 0
NUP50-203ENST00000407019 OR13C3Q8NGS6 347 aa15.08■□□□□ 0
NUP50-203ENST00000407019 RNF138Q8WVD3 245 aa15.08■□□□□ 0
NUP50-203ENST00000407019 TTC9Q92623 222 aa15.08■□□□□ 0
NUP50-203ENST00000407019 SLC25A44Q96H78 314 aaPredicted RBP15.08■□□□□ 0
NUP50-203ENST00000407019 WDR77Q9BQA1 342 aaPredicted RBP15.08■□□□□ 0
NUP50-203ENST00000407019 DUSP23Q9BVJ7 150 aa15.08■□□□□ 0
NUP50-203ENST00000407019 B3GNT2Q9NY97 397 aa15.08■□□□□ 0
NUP50-203ENST00000407019 KLRF1Q9NZS2 232 aa15.08■□□□□ 0
NUP50-203ENST00000407019 EIF3KQ9UBQ5 218 aaKnown RBP15.08■□□□□ 0
NUP50-203ENST00000407019 U3KQ87 197 aa15.08■□□□□ 0
NUP50-203ENST00000407019 SNRPGP15A8MWD9 76 aa15.07■□□□□ 0
NUP50-203ENST00000407019 AQP8O94778 261 aa15.07■□□□□ 0
NUP50-203ENST00000407019 ACHEP22303 614 aa15.07■□□□□ 0
NUP50-203ENST00000407019 EPHA8P29322 1005 aaPredicted RBP15.07■□□□□ 0
NUP50-203ENST00000407019 DNASE1L1P49184 302 aa15.07■□□□□ 0
NUP50-203ENST00000407019 SQSTM1Q13501 440 aa15.07■□□□□ 0
NUP50-203ENST00000407019 RBMS2Q15434 407 aaKnown RBP15.07■□□□□ 0
NUP50-203ENST00000407019 PCK2Q16822 640 aa15.07■□□□□ 0
NUP50-203ENST00000407019 LGALSLQ3ZCW2 172 aaPredicted RBP15.07■□□□□ 0
NUP50-203ENST00000407019 ZNF626Q68DY1 528 aa15.07■□□□□ 0
NUP50-203ENST00000407019 LINC00346Q8IVM7 164 aa15.07■□□□□ 0
NUP50-203ENST00000407019 WDFY1Q8IWB7 410 aa15.07■□□□□ 0
NUP50-203ENST00000407019 SPICQ8N5J4 248 aa15.07■□□□□ 0
NUP50-203ENST00000407019 OR5L2Q8NGL0 311 aa15.07■□□□□ 0
NUP50-203ENST00000407019 ST7LQ8TDW4 575 aa15.07■□□□□ 0
NUP50-203ENST00000407019 SLC25A28Q96A46 364 aa15.07■□□□□ 0
NUP50-203ENST00000407019 ATG5Q9H1Y0 275 aa15.07■□□□□ 0
NUP50-203ENST00000407019 PRMT8Q9NR22 394 aaPredicted RBP15.07■□□□□ 0
NUP50-203ENST00000407019 MED29Q9NX70 200 aa15.07■□□□□ 0
NUP50-203ENST00000407019 ALKBH4Q9NXW9 302 aa15.07■□□□□ 0
NUP50-203ENST00000407019 PPP4R1LQ9P1A2 415 aa15.07■□□□□ 0
NUP50-203ENST00000407019 OR52A1Q9UKL2 312 aa15.07■□□□□ 0
NUP50-203ENST00000407019 TMEM265A0A087WTH1 108 aa15.07■□□□□ 0
NUP50-203ENST00000407019 LOC107986453A0A1B0GWG9 222 aa15.07■□□□□ 0
NUP50-203ENST00000407019 A0A1W2PPC1 479 aa15.07■□□□□ 0
NUP50-203ENST00000407019 G3V3Q6 166 aa15.07■□□□□ 0
NUP50-203ENST00000407019 FOSL2P15408 326 aa15.07■□□□□ 0
NUP50-203ENST00000407019 HTR2CP28335 458 aa15.07■□□□□ 0
NUP50-203ENST00000407019 ZNF81P51508 661 aa15.07■□□□□ 0
NUP50-203ENST00000407019 ZNF41P51814 821 aaPredicted RBP15.07■□□□□ 0
NUP50-203ENST00000407019 GUCA2AQ02747 115 aa15.07■□□□□ 0
NUP50-203ENST00000407019 RADILQ96JH8 1075 aa15.07■□□□□ 0
NUP50-203ENST00000407019 POTEKPQ9BYX7 375 aa15.07■□□□□ 0
NUP50-203ENST00000407019 HEXA-AS1Q9H8Q6 139 aa15.07■□□□□ 0
NUP50-203ENST00000407019 G6PC2Q9NQR9 355 aa15.07■□□□□ 0
NUP50-203ENST00000407019 HRH3Q9Y5N1 445 aa15.07■□□□□ 0
NUP50-203ENST00000407019 EXPH5Q8NEV8 1989 aa15.07■□□□□ 0
NUP50-203ENST00000407019 IGKV1D-43A0A0B4J1Z2 117 aa15.06■□□□□ 0
NUP50-203ENST00000407019 LIPT2A6NK58 231 aa15.06■□□□□ 0
NUP50-203ENST00000407019 SHISA8B8ZZ34 492 aa15.06■□□□□ 0
NUP50-203ENST00000407019 H3BML4 177 aa15.06■□□□□ 0
NUP50-203ENST00000407019 ETV2O00321 342 aaPredicted RBP15.06■□□□□ 0
NUP50-203ENST00000407019 ISG15P05161 165 aa15.06■□□□□ 0
NUP50-203ENST00000407019 DCNP07585 359 aaKnown RBP15.06■□□□□ 0
NUP50-203ENST00000407019 GTF2F2P13984 249 aa15.06■□□□□ 0
NUP50-203ENST00000407019 PRSS3P35030 304 aa15.06■□□□□ 0
NUP50-203ENST00000407019 CCL7P80098 99 aa15.06■□□□□ 0
NUP50-203ENST00000407019 C19orf57Q0VDD7 668 aa15.06■□□□□ 0
NUP50-203ENST00000407019 LRFN4Q6PJG9 635 aa15.06■□□□□ 0
NUP50-203ENST00000407019 DEGS2Q6QHC5 323 aa15.06■□□□□ 0
NUP50-203ENST00000407019 ZNF704Q6ZNC4 412 aaPredicted RBP15.06■□□□□ 0
NUP50-203ENST00000407019 CPEB2Q7Z5Q1 589 aaKnown RBP15.06■□□□□ 0
NUP50-203ENST00000407019 ZNF680Q8NEM1 530 aa15.06■□□□□ 0
NUP50-203ENST00000407019 OR6M1Q8NGM8 313 aa15.06■□□□□ 0
NUP50-203ENST00000407019 HLA-CQ95604 372 aa15.06■□□□□ 0
NUP50-203ENST00000407019 SORCS2Q96PQ0 1159 aa15.06■□□□□ 0
NUP50-203ENST00000407019 NKX3-1Q99801 234 aaPredicted RBP15.06■□□□□ 0
NUP50-203ENST00000407019 CHIAQ9BZP6 476 aa15.06■□□□□ 0
NUP50-203ENST00000407019 B3GALT5Q9Y2C3 310 aa15.06■□□□□ 0
NUP50-203ENST00000407019 A0A1W2PQM1 296 aa15.05■□□□□ 0
NUP50-203ENST00000407019 MEGF11A6BM72 1044 aa15.05■□□□□ 0
NUP50-203ENST00000407019 PYCARD-AS1I3L0S3 204 aa15.05■□□□□ 0
NUP50-203ENST00000407019 NOS1APO75052 506 aaPredicted RBP15.05■□□□□ 0
NUP50-203ENST00000407019 TOXO94900 526 aa15.05■□□□□ 0
NUP50-203ENST00000407019 AKAIN1P0CW23 69 aa15.05■□□□□ 0
NUP50-203ENST00000407019 ZNF24P17028 368 aa15.05■□□□□ 0
NUP50-203ENST00000407019 MSX1P28360 303 aa15.05■□□□□ 0
NUP50-203ENST00000407019 SSBP1Q04837 148 aaKnown RBP15.05■□□□□ 0
NUP50-203ENST00000407019 GLYATL3Q5SZD4 288 aa15.05■□□□□ 0
NUP50-203ENST00000407019 MRGPRX4Q96LA9 322 aa15.05■□□□□ 0
NUP50-203ENST00000407019 CITED4Q96RK1 184 aa15.05■□□□□ 0
NUP50-203ENST00000407019 CMKLR1Q99788 373 aa15.05■□□□□ 0
NUP50-203ENST00000407019 GINS4Q9BRT9 223 aa15.05■□□□□ 0
NUP50-203ENST00000407019 A0A0C4DFX4 3053 aa15.05■□□□□ 0
NUP50-203ENST00000407019 IGHV5-10-1A0A0J9YXX1 117 aa15.05■□□□□ -0
NUP50-203ENST00000407019 TMEM269A0A1B0GVZ9 245 aa15.05■□□□□ -0
NUP50-203ENST00000407019 A0A1W2PNV4 684 aa15.05■□□□□ -0
NUP50-203ENST00000407019 CCDC85CA6NKD9 419 aa15.05■□□□□ -0
NUP50-203ENST00000407019 DOK2O60496 412 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms