RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 OR56B4Q8NH76 319 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 PAQR8Q8TEZ7 354 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 FAM222BQ8WU58 562 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 DCAKDQ8WVC6 231 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 CSPG4P5Q96PW8 444 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 SMIM14Q96QK8 99 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 TGS1Q96RS0 853 aaKnown RBP3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 CYTH2Q99418 400 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 GAL3ST1Q99999 423 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 SELENOIQ9C0D9 397 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 PPA2Q9H2U2 334 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 EXO5Q9H790 373 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 FGFR1OP2Q9NVK5 253 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 ARL2BPQ9Y2Y0 163 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 HEY1Q9Y5J3 304 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 PCNX3Q9H6A9 2034 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 WDR90Q96KV7 1748 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 COL11A1P12107 1806 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 LCTP09848 1927 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 IGHV1OR15-1A0A075B7D0 117 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 HACD1B0YJ81 288 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 LOC110117498-PIK3R3F6TDL0 507 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 H0YHG0 523 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 M0QZ92 97 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 CDX4O14627 284 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 SERF1AO75920 110 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 PIAS1O75925 651 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 CGAP01215 116 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 GATA1P15976 413 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 IFNA8P32881 189 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 RPA3P35244 121 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 YAP1P46937 504 aaKnown RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 PLP1P60201 277 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 GBE1Q04446 702 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 SCRN3Q0VDG4 424 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR5I1Q13606 314 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 DUSP7Q16829 419 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 PARP15Q460N3 678 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 XKR7Q5GH72 579 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 SPANXN2Q5MJ10 180 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 TWF2Q6IBS0 349 aaKnown RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 CGB2Q6NT52 195 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 ACOT7LQ6ZUV0 252 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 SLC26A11Q86WA9 606 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 ERI1Q8IV48 349 aaKnown RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 DEFB106AQ8N104 65 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 C4orf33Q8N1A6 199 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 TMEM86AQ8N2M4 240 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 FTMTQ8N4E7 242 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF525Q8N782 197 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 CCDC71LQ8N9Z2 235 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 KLHL30-AS1Q8NEE0 82 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 GTSF1Q8WW33 167 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 NDRG1Q92597 394 aaKnown RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF75CPQ92670 426 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 HAVCR1Q96D42 359 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 LRRC39Q96DD0 335 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 PLEKHA8Q96JA3 519 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 OLFM3Q96PB7 478 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 QKIQ96PU8 341 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 CNN2Q99439 309 aaKnown RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 HIST1H4GQ99525 98 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 PAIP2Q9BPZ3 127 aaKnown RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 CENPKQ9BS16 269 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 MTG1Q9BT17 334 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 Q9H3A6 140 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 DHX35Q9H5Z1 703 aaKnown RBP3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 NEK6Q9HC98 313 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 SLC40A1Q9NP59 571 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 KLHL21Q9UJP4 597 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 STAP1Q9ULZ2 295 aa3.6□□□□□ -1.83
HMGB3P18-201ENST00000406327 SIP14410 1827 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 MYBPHLA2RUH7 354 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 ARL5CA6NH57 179 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 FAM159BA6NKW6 160 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR5B21A6NL26 309 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 ABCD4O14678 606 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 RNF13O43567 381 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 EDF1O60869 148 aaKnown RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 TMEM50AO95807 157 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 KRT6AP02538 564 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 APOEP02649 317 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 C1QAP02745 245 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 SEMG1P04279 462 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 KLK3P07288 261 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 SNRPAP09012 282 aaKnown RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 MLNP12872 115 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 CYBAP13498 195 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 ALDH3A1P30838 453 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 FDFT1P37268 417 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 MAGEA3P43357 314 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 HCAR3P49019 387 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 MAP3K7CLP57077 242 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 DAOAP59103 153 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 YWHAGP61981 247 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 KCNJ2P63252 427 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 SARNPP82979 210 aaKnown RBP3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 ADIGQ0VDE8 80 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 DNAJC3Q13217 504 aa3.59□□□□□ -1.83
HMGB3P18-201ENST00000406327 GK3PQ14409 553 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms