RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 UGT2A3Q6UWM9 527 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 YTHDF3Q7Z739 585 aaKnown RBP16.57■□□□□ 0.24
RTN4-207ENST00000402434 PAQR4Q8N4S7 273 aaPredicted RBP16.57■□□□□ 0.24
RTN4-207ENST00000402434 OR52E2Q8NGJ4 325 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 OR1J2Q8NGS2 313 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 NRBF2Q96F24 287 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 FOXN4Q96NZ1 517 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 TSSK6Q9BXA6 273 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 RACGAP1Q9H0H5 632 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 WNT5BQ9H1J7 359 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 RERGLQ9H628 205 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 EMC7Q9NPA0 242 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 TBC1D23Q9NUY8 699 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 BAIAP2Q9UQB8 552 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 FKBP7Q9Y680 259 aa16.57■□□□□ 0.24
RTN4-207ENST00000402434 ZNF469Q96JG9 3925 aaPredicted RBP16.56■□□□□ 0.24
RTN4-207ENST00000402434 MPZL1O95297 269 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 SOX14O95416 240 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 CCL2P13500 99 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 PRKACGP22612 351 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 APEX1P27695 318 aaKnown RBP16.56■□□□□ 0.24
RTN4-207ENST00000402434 PCSK6P29122 969 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.56■□□□□ 0.242e-6■□□□□ 8.9
RTN4-207ENST00000402434 TBC1D28Q2M2D7 210 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 ALDH16A1Q8IZ83 802 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 HS3ST5Q8IZT8 346 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 OR2T33Q8NG76 320 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 AKR7LQ8NHP1 331 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 POM121L2Q96KW2 1035 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 PLK3Q9H4B4 646 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 SRA1Q9HD15 236 aaKnown RBP16.56■□□□□ 0.24
RTN4-207ENST00000402434 RPRD1BQ9NQG5 326 aaKnown RBP16.56■□□□□ 0.24
RTN4-207ENST00000402434 AP4S1Q9Y587 144 aa16.56■□□□□ 0.24
RTN4-207ENST00000402434 TMEM129A0AVI4 362 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 GPRIN2O60269 458 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 NDUFS7O75251 213 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 CIB2O75838 187 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 IGHV4-39P01824 125 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 GAAP10253 952 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 ANXA8P13928 327 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 STOMP27105 288 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 APLNRP35414 380 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 ARHGDIAP52565 204 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 SLC36A3Q495N2 470 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 SHQ1Q6PI26 577 aaKnown RBP16.55■□□□□ 0.24
RTN4-207ENST00000402434 SDR9C7Q8NEX9 313 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 OR4Q3Q8NH05 313 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 CDH20Q9HBT6 801 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 GDF2Q9UK05 429 aaPredicted RBP16.55■□□□□ 0.24
RTN4-207ENST00000402434 CMAHPQ9Y471 501 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 PMF1-BGLAPU3KQ54 211 aa16.55■□□□□ 0.24
RTN4-207ENST00000402434 LOC100509620A0A075B734 347 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 CD99P14209 185 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 RPS23P62266 143 aaKnown RBP16.54■□□□□ 0.24
RTN4-207ENST00000402434 SNRPD2P62316 118 aaKnown RBP16.54■□□□□ 0.24
RTN4-207ENST00000402434 GLO1Q04760 184 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 SCRN3Q0VDG4 424 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 AQP6Q13520 282 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 ATP6AP1Q15904 470 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 MSMPQ1L6U9 139 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 SLC26A10Q8NG04 563 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 C11orf40Q8WZ69 217 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 DOK1Q99704 481 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 ZNF556Q9HAH1 456 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 BARX1Q9HBU1 254 aaPredicted RBP16.54■□□□□ 0.24
RTN4-207ENST00000402434 DLL4Q9NR61 685 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 FBXO9Q9UK97 447 aaPredicted RBP16.54■□□□□ 0.24
RTN4-207ENST00000402434 ICMTO60725 284 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 GPANK1O95872 356 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 COX5BP10606 129 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 EVX1P49640 407 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 UCP2P55851 309 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 DBPQ10586 325 aaPredicted RBP16.54■□□□□ 0.24
RTN4-207ENST00000402434 RAB35Q15286 201 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 ZNF774Q6NX45 483 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 CYB561A3Q8NBI2 242 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 SLC37A3Q8NCC5 494 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 TEX47Q8TBZ9 253 aa16.54■□□□□ 0.24
RTN4-207ENST00000402434 MRPL24Q96A35 216 aaKnown RBP16.54■□□□□ 0.24
RTN4-207ENST00000402434 RBM4Q9BWF3 364 aaKnown RBP16.54■□□□□ 0.24
RTN4-207ENST00000402434 MTORP42345 2549 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 TFP02787 698 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 FASP25445 335 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 RAD52P43351 418 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 GDI2P50395 445 aaKnown RBP16.53■□□□□ 0.24
RTN4-207ENST00000402434 ACTR3P61158 418 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 HIST1H3AP68431 136 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 HIST2H3PS2Q5TEC6 136 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 OTPQ5XKR4 325 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 DNM1P46Q6ZS02 220 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 HIST2H3AQ71DI3 136 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 Q96MF0 132 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 BDH2Q9BUT1 245 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 MRPL37Q9BZE1 423 aaKnown RBP16.53■□□□□ 0.24
RTN4-207ENST00000402434 NMNAT2Q9BZQ4 307 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 BCL2L14Q9BZR8 327 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 FN3KQ9H479 309 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 ASH2LQ9UBL3 628 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 KLHL21Q9UJP4 597 aa16.53■□□□□ 0.24
RTN4-207ENST00000402434 C5orf49A4QMS7 147 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms