RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 CSNK2A1P68400 391 aaPredicted RBP10.34□□□□□ -0.75
SKA3-203ENST00000400018 SLC3A1Q07837 685 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 AQP6Q13520 282 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 CRTC2Q53ET0 693 aaPredicted RBP10.34□□□□□ -0.75
SKA3-203ENST00000400018 RSBN1Q5VWQ0 802 aaPredicted RBP10.34□□□□□ -0.75
SKA3-203ENST00000400018 VWA1Q6PCB0 445 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 SYT9Q86SS6 491 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 SIAH3Q8IW03 269 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 SLC35F2Q8IXU6 374 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 UBE2J2Q8N2K1 259 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 C9orf106Q8NAJ2 232 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 C11orf40Q8WZ69 217 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 MUL1Q969V5 352 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 OPALINQ96PE5 141 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 PDCD1LG2Q9BQ51 273 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 CHCHD6Q9BRQ6 235 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 CENPMQ9NSP4 180 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 IKZF2Q9UKS7 526 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 TRAPPC4Q9Y296 219 aa10.34□□□□□ -0.75
SKA3-203ENST00000400018 CSMD2Q7Z408 3487 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 EFCAB10A6NFE3 127 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 PCP4L1A6NKN8 68 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 CCL2P13500 99 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 CD36P16671 472 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 LAP3P28838 519 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 PXDC1Q5TGL8 231 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 OR7E24Q6IFN5 339 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 CHMP1BQ7LBR1 199 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 AAED1Q7RTV5 226 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 CD163Q86VB7 1156 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 TIGD4Q8IY51 512 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 NAXEQ8NCW5 288 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 ANGPTL6Q8NI99 470 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 SLC25A44Q96H78 314 aaPredicted RBP10.33□□□□□ -0.76
SKA3-203ENST00000400018 ADAD1Q96M93 576 aaKnown RBP10.33□□□□□ -0.76
SKA3-203ENST00000400018 C1QTNF6Q9BXI9 259 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 HDHD5Q9BXW7 423 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 MRPL13Q9BYD1 178 aaKnown RBP10.33□□□□□ -0.76
SKA3-203ENST00000400018 PRRG3Q9BZD7 231 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 EXOSC4Q9NPD3 245 aaKnown RBP10.33□□□□□ -0.76
SKA3-203ENST00000400018 SLC7A10Q9NS82 523 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 CHD6Q8TD26 2715 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 J3QRE1 110 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 GLCEO94923 617 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 MYL12AP19105 171 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 TGFBR2P37173 567 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 CAV3P56539 151 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 GABARAPL2P60520 117 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 RPS25P62851 125 aaKnown RBP10.33□□□□□ -0.76
SKA3-203ENST00000400018 IRF3Q14653 427 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 SPHARQ15513 63 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 MEDAGQ5VYS4 303 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 CCDC28AQ8IWP9 274 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 NANOGP1Q8N7R0 232 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 TEX19Q8NA77 164 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 CNN2Q99439 309 aaKnown RBP10.33□□□□□ -0.76
SKA3-203ENST00000400018 FAM117AQ9C073 453 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 SLCO1C1Q9NYB5 712 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 ASH2LQ9UBL3 628 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 KLHL21Q9UJP4 597 aa10.33□□□□□ -0.76
SKA3-203ENST00000400018 LSM2Q9Y333 95 aaKnown RBP10.33□□□□□ -0.76
SKA3-203ENST00000400018 PCDHGA9Q9Y5G4 932 aaKnown RBP10.33□□□□□ -0.76
SKA3-203ENST00000400018 SVEP1Q4LDE5 3571 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 ZNF503-AS2A6NEH8 195 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 CD8B2A6NJW9 211 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 SLC22A31A6NKX4 558 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 TTLL8A6PVC2 850 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 ERVH48-1M5A8F1 160 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 TXNDC12O95881 172 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 CD8BP10966 210 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 RBMXP38159 391 aaKnown RBP10.32□□□□□ -0.76
SKA3-203ENST00000400018 MXD1Q05195 221 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 RAB40BQ12829 278 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 FAPQ12884 760 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 ARL9Q6T311 187 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 CFAP77Q6ZQR2 320 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 SEM1Q6ZVN7 128 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 DCXRQ7Z4W1 244 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 MEIOBQ8N635 442 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 ACBD7Q8N6N7 88 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 NOXO1Q8NFA2 376 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 OR13F1Q8NGS4 319 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 OR10AC1Q8NH08 325 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 C9orf43Q8TAL5 461 aaPredicted RBP10.32□□□□□ -0.76
SKA3-203ENST00000400018 NDNFQ8TB73 568 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 RFKQ969G6 155 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 SOX7Q9BT81 388 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 ACKR4Q9NPB9 350 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 AKIP1Q9NQ31 210 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 DIMT1Q9UNQ2 313 aaKnown RBP10.32□□□□□ -0.76
SKA3-203ENST00000400018 NOSIPQ9Y314 301 aaKnown RBP10.32□□□□□ -0.76
SKA3-203ENST00000400018 MAP1AP78559 2803 aaPredicted RBP10.32□□□□□ -0.76
SKA3-203ENST00000400018 HIVEP3Q5T1R4 2406 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 A0A1W2PNV4 684 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 ZNF432O94892 652 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 TOXO94900 526 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 PRB1P04280 392 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 DBHP09172 617 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 CSNK1A1P48729 337 aa10.32□□□□□ -0.76
SKA3-203ENST00000400018 TMBIM6P55061 237 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms