RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PROCRQ9UNN8 238 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 SRMP19623 302 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 NFYAP23511 347 aaPredicted RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 THBS3P49746 956 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 MAP2K6P52564 334 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 NRARPQ7Z6K4 114 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 TAF1P21675 1872 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 SDHBP21912 280 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 APEX1P27695 318 aaKnown RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 TAGLN2P37802 199 aaKnown RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 ZNF816Q0VGE8 651 aaPredicted RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 STEAP1BQ6NZ63 245 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 ALKAL1Q6UXT8 129 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 SLC22A24Q8N4F4 322 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 SFT2D1Q8WV19 159 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 ELSPBP1Q96BH3 223 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 ARPC5LQ9BPX5 153 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 TMEM189-UBE2V1I3L0A0 370 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 P2RX6O15547 441 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 NPPBP16860 134 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 HSF1Q00613 529 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 ZNF169Q14929 603 aaPredicted RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 HS3ST2Q9Y278 367 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 GPR55Q9Y2T6 319 aaPredicted RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 TEX51A0A1B0GUA7 166 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 LRIT2A6NDA9 550 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 RBMS2Q15434 407 aaKnown RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 IAH1Q2TAA2 248 aaPredicted RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 ZNF385BQ569K4 471 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 H1FNTQ75WM6 255 aaPredicted RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 SLC35A4Q96G79 324 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 ACSS1Q9NUB1 689 aaPredicted RBP12.59□□□□□ -0.39
VAPA-202ENST00000400000 NUP98P52948 1817 aa12.58□□□□□ -0.39
VAPA-202ENST00000400000 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.58□□□□□ -0.39
VAPA-202ENST00000400000 IDSB3KWA1 339 aa12.58□□□□□ -0.39
VAPA-202ENST00000400000 ST6GAL1P15907 406 aa12.58□□□□□ -0.39
VAPA-202ENST00000400000 EMDP50402 254 aa12.58□□□□□ -0.39
VAPA-202ENST00000400000 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.39
VAPA-202ENST00000400000 GCNT2Q8N0V5 402 aa12.58□□□□□ -0.39
VAPA-202ENST00000400000 SLC30A7Q8NEW0 376 aa12.58□□□□□ -0.39
VAPA-202ENST00000400000 ADAMTS14Q8WXS8 1223 aa12.58□□□□□ -0.39
VAPA-202ENST00000400000 ASH2LQ9UBL3 628 aa12.58□□□□□ -0.39
VAPA-202ENST00000400000 WDR1O75083 606 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 GRB2P62993 217 aaKnown RBP12.58□□□□□ -0.4
VAPA-202ENST00000400000 EXT1Q16394 746 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 CHTF18Q8WVB6 975 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 ZNF346Q9UL40 294 aaKnown RBP12.58□□□□□ -0.4
VAPA-202ENST00000400000 PPT2Q9UMR5 302 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 HOXC13P31276 330 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 HAGHQ16775 308 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 CREB3L2Q70SY1 520 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 ST8SIA4Q92187 359 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 LTB4R2Q9NPC1 389 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 UGT2A1Q9Y4X1 527 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 C7orf72A4D263 438 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 OR5K3A6NET4 321 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 SULT1C2O00338 296 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 CXCL13O43927 109 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 CLDN15P56746 228 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 CYS1Q717R9 158 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 FBXW5Q969U6 566 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 CTNSO60931 367 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 OR2T7P0C7T2 308 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 INSM1Q01101 510 aaPredicted RBP12.58□□□□□ -0.4
VAPA-202ENST00000400000 GJC3Q8NFK1 279 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 OR51S1Q8NGJ8 323 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 EVPLQ92817 2033 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 C20orf85Q9H1P6 137 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 CHST2Q9Y4C5 530 aa12.58□□□□□ -0.4
VAPA-202ENST00000400000 A0A087WV62 115 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 SLC35E2P0CK97 266 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 HBG1P69891 147 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 HBG2P69892 147 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 ABHD17CQ6PCB6 329 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 ZFP62Q8NB50 900 aaPredicted RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 ZNRF4Q8WWF5 429 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 SLC39A13Q96H72 371 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 SAGE1Q9NXZ1 904 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 OPN1MWP04001 364 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 DHRS4L1P0CG22 281 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 OPN1MW2P0DN77 364 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 OPN1MW3P0DN78 364 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 TBXA2RP21731 343 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 TEAD1P28347 426 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 RPS27AP62979 156 aaKnown RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 UBA52P62987 128 aaKnown RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 RAC1P63000 192 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 DPY19L2P2Q6ZN68 376 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 TMEM231Q9H6L2 316 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 FBXO4Q9UKT5 387 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 SPRY1O43609 319 aaPredicted RBP12.57□□□□□ -0.4
VAPA-202ENST00000400000 CRYBA1P05813 215 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 GPR12P47775 334 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 TLE4Q04727 773 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 RNF151Q2KHN1 245 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
VAPA-202ENST00000400000 OR10R2Q8NGX6 335 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms