RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PIPP12273 146 aaPredicted RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 LIPAP38571 399 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 NAAAQ02083 359 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 PLP2Q04941 152 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 CRMP1Q14194 572 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 MOGQ16653 247 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 TBC1D28Q2M2D7 210 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 MBNL2Q5VZF2 373 aaKnown RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 PAMR1Q6UXH9 720 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 MEPCEQ7L2J0 689 aaKnown RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 SLC16A14Q7RTX9 510 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 ALDH16A1Q8IZ83 802 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 CBR4Q8N4T8 237 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 NMNAT3Q96T66 252 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 PLEKHF2Q9H8W4 249 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 ELOVL3Q9HB03 270 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 MYOZ1Q9NP98 299 aaPredicted RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 NPAP1Q9NZP6 1156 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP16-204ENST00000399976 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 SHISA9B4DS77 424 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 SIAH2O43255 324 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 SLC16A7O60669 478 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 MRPS14O60783 128 aaKnown RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 GLRXP35754 106 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 PPOXP50336 477 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 ACTC1P68032 377 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 ACTA1P68133 377 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 EGR3Q06889 387 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 TOP3AQ13472 1001 aaPredicted RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 ZNF691Q5VV52 312 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 CXXC5Q7LFL8 322 aaKnown RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 MDP1Q86V88 176 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 CDC20BQ86Y33 519 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 ZNF555Q8NEP9 628 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 ZFAND2BQ8WV99 257 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 PTP4A1Q93096 173 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 MRPL48Q96GC5 212 aaKnown RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 PLEKHA8Q96JA3 519 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 POM121L2Q96KW2 1035 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 CXXC4Q9H2H0 198 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 MOB1AQ9H8S9 216 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 FAM118AQ9NWS6 357 aa6.54□□□□□ -1.36
USP16-204ENST00000399976 EXOGQ9Y2C4 368 aaKnown RBP6.54□□□□□ -1.36
USP16-204ENST00000399976 IGKV1D-43A0A0B4J1Z2 117 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 DPRXA6NFQ7 191 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 J3QRE1 110 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 SLC2A10O95528 541 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 FSTL3O95633 263 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 CPT2P23786 658 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 GSTT1P30711 240 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ELFN2Q5R3F8 820 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 PRSS57Q6UWY2 283 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ZNF704Q6ZNC4 412 aaPredicted RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 IGFN1Q86VF2 1251 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 HS3ST5Q8IZT8 346 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 OR10H5Q8NGA6 315 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 OR4K13Q8NH42 304 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 RHOXF1Q8NHV9 184 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 RNF133Q8WVZ7 376 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 C11orf40Q8WZ69 217 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 FBXO17Q96EF6 278 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 INTS14Q96SY0 518 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 WNT5BQ9H1J7 359 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 RGCCQ9H4X1 137 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ABCB9Q9NP78 766 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 PNRC2Q9NPJ4 139 aaKnown RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 HINT3Q9NQE9 182 aaKnown RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 MRPL22Q9NWU5 206 aaKnown RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 NKIRAS2Q9NYR9 191 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 LHFPL6Q9Y693 200 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 COMMD3-BMI1R4GMX3 469 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 IGLV3-9A0A075B6K5 115 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 IGHV2OR16-5A0A0B4J2B6 119 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 LOC100130705A0A1B0GUX0 176 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 SAC3D1A6NKF1 404 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 H7C417 338 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 CRYAAP02489 173 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 CECR9P0C854 216 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 B4GALT1P15291 398 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ZNF250P15622 560 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 NR4A1P22736 598 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 RAD52P43351 418 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 FOXG1P55316 489 aaPredicted RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 RAB1AP62820 205 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 MRPS11P82912 194 aaKnown RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 FMODQ06828 376 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ETFDHQ16134 617 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 CCDC92Q53HC0 331 aaPredicted RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 DRAM2Q6UX65 266 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 VASH1Q7L8A9 365 aaPredicted RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 KCTD20Q7Z5Y7 419 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ZNF584Q8IVC4 421 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 SDR9C7Q8NEX9 313 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 OTOSQ8NHW6 89 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ST7LQ8TDW4 575 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 PIGTQ969N2 578 aa6.53□□□□□ -1.36
USP16-204ENST00000399976 ZNF837Q96EG3 531 aaPredicted RBP6.53□□□□□ -1.36
USP16-204ENST00000399976 DIRC2Q96SL1 478 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms