RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PMPCAQ10713 525 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 GPR18Q14330 331 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 C12orf76Q8N812 135 aaPredicted RBP12.61□□□□□ -0.39
APOB-202ENST00000399256 OR1M1Q8NGA1 313 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 OR5AP2Q8NGF4 316 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 FAM174AQ8TBP5 190 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 LPAR4Q99677 370 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 CMKLR1Q99788 373 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 EDEM2Q9BV94 578 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 ZMAT5Q9UDW3 170 aaKnown RBP12.61□□□□□ -0.39
APOB-202ENST00000399256 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 NPIPB9F8W1W9 429 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 OIP5O43482 229 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 SLC35E2P0CK97 266 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 VAMP1P23763 118 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 ZBTB25P24278 435 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 LSSP48449 732 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 RPS21P63220 83 aaKnown RBP12.61□□□□□ -0.39
APOB-202ENST00000399256 CXADRP78310 365 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 MICBQ29980 383 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 CDNFQ49AH0 187 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 TMEM225Q6GV28 225 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 FAM166AQ6J272 317 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 LYG2Q86SG7 212 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 CPNE2Q96FN4 548 aaPredicted RBP12.61□□□□□ -0.39
APOB-202ENST00000399256 VSTM2LQ96N03 204 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 SELENOIQ9C0D9 397 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 SLC17A5Q9NRA2 495 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 DHDHQ9UQ10 334 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 MRPS18BQ9Y676 258 aaKnown RBP12.61□□□□□ -0.39
APOB-202ENST00000399256 CDH23Q9H251 3354 aa12.61□□□□□ -0.39
APOB-202ENST00000399256 A0A0B4J2A0 478 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 C13orf42A0A1B0GVH6 325 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 FOXS1O43638 330 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 APOC1P02654 83 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 ACTR1BP42025 376 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 ACTR1AP61163 376 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 PDGFRLQ15198 375 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 PAPD4Q6PIY7 484 aaKnown RBP12.6□□□□□ -0.39
APOB-202ENST00000399256 ZNF813Q6ZN06 617 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 ZNF761Q86XN6 746 aaPredicted RBP12.6□□□□□ -0.39
APOB-202ENST00000399256 ACBD4Q8NC06 268 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 RXFP4Q8TDU9 374 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 OR1E3Q8WZA6 343 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 HOXB13Q92826 284 aaPredicted RBP12.6□□□□□ -0.39
APOB-202ENST00000399256 MYOZ1Q9NP98 299 aaPredicted RBP12.6□□□□□ -0.39
APOB-202ENST00000399256 MMP25Q9NPA2 562 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 SHPKQ9UHJ6 478 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 ATG2BQ96BY7 2078 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 FGF16O43320 207 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 ZNF208O43345 1280 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 RENP00797 406 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 CTSBP07858 339 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 HOXB1P14653 301 aaPredicted RBP12.6□□□□□ -0.39
APOB-202ENST00000399256 ADAM8P78325 824 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 IL13RA1P78552 427 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 MFGE8Q08431 387 aaPredicted RBP12.6□□□□□ -0.39
APOB-202ENST00000399256 SQSTM1Q13501 440 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 ELOCQ15369 112 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 SLC22A6Q4U2R8 563 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 ZNF584Q8IVC4 421 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 OR51A2Q8NGJ7 313 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 OR4A4PQ8NGN8 299 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 OR9A4Q8NGU2 314 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 GLYATL2Q8WU03 294 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 TMED6Q8WW62 240 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 DCUN1D4Q92564 292 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 ARL11Q969Q4 196 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 TSACCQ96A04 125 aaPredicted RBP12.6□□□□□ -0.39
APOB-202ENST00000399256 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 MICU1Q9BPX6 476 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 Q9N2J8 555 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 SLC22A11Q9NSA0 550 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 A0A1W2PPC1 479 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 PQLC2LA1A4F0 135 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 C9orf170A2RU37 121 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 POM121BA6NF01 834 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 TNFSF14O43557 240 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 HCRTR1O43613 425 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 OR2T1O43869 369 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 GPM6BQ13491 265 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 JAGN1Q8N5M9 183 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 CSNK1A1LQ8N752 337 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 RELTQ969Z4 430 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 KTI12Q96EK9 354 aaPredicted RBP12.6□□□□□ -0.39
APOB-202ENST00000399256 PIK3IP1Q96FE7 263 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 CRB3Q9BUF7 120 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 FAM96BQ9Y3D0 163 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 CSAG2Q9Y5P2 127 aa12.6□□□□□ -0.39
APOB-202ENST00000399256 C5orf51A6NDU8 294 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 TGFBR3LH3BV60 316 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 KAT7O95251 611 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 FARS2O95363 451 aaKnown RBP12.59□□□□□ -0.39
APOB-202ENST00000399256 CD74P04233 296 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 AKR1C4P17516 323 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 CFPP27918 469 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 DCDP81605 110 aaKnown RBP12.59□□□□□ -0.39
APOB-202ENST00000399256 SPOCK1Q08629 439 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms